Citrus x clementina (clementine): CICLE_v10031679mg
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Entry
CICLE_v10031679mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10031679mg
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10031679mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10031679mg
Membrane trafficking [BR:
cic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
CICLE_v10031679mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CICLE_v10031679mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING-like
DUF7129
McsA
VPS18_RING_C
Rad50_zn_hook
DUF7563
FAR1_N
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
18043798
NCBI-ProteinID:
XP_006435651
UniProt:
V4TGQ4
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MSSIVSSSSYWCYRCSRFVRVFSRDDVVSCPDCDGGFVEEIENTPRGIHSTDIHRGPGPG
PGPGRMRFPAAAMYMIGSSNNNSNNIINSSNRSNRDPNNSAGPVLRRSRRTGGDRSPFNP
VIVLRGPVNGDVDNNGNGYELYYDDGEGSGLRPLPRSMTEFLLGSGFERLLEQLSQIDMN
AIGGFENPPASKSAIENMPSILIDSSYVELESHCAVCKEAFELGSEAREMPCKHIYHSDC
ILPWLSLRNSCPVCRHELPADNNSNQSNVDESDNGENGQSNEDEAVGLTIWRLPGGGFAV
GRFSGGRRGGERELPVVYTEMDGGFNNGGLPRRVSWGSRGSRGRERGGGFVGRFVRSLFG
CFGGGSGSSSTSGSSDSRIRRRGTSRAVSLFNVSSRRSAWDVDVSSEGRRW
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgatagtttcatcatcgtcgtactggtgttacagatgcagccgtttcgttagg
gttttcagccgggacgacgtcgtctcgtgtcccgactgcgacggcgggttcgtcgaagag
atcgagaatacgccacgtggcatccactcaaccgacatccaccgcggccccgggcccggc
cccggccctggccggatgagattccctgctgccgcgatgtacatgattggaagcagtaat
aataatagtaataatataatcaatagtagtaaccggtcgaatcgagatccgaacaactcg
gccggtccggttcttcgaagaagccgcagaactggcggagaccggtctccgttcaatcca
gtcatcgtgctgcgtggaccagtcaacggggacgtcgataataacggtaacggatatgaa
ttgtactacgatgatggtgaagggtctggattaagacccttgccgaggagtatgaccgag
tttttgctcggatcaggatttgaacggctgcttgagcagttatcgcagattgatatgaac
gcaatcggtggatttgagaatccgccggcttccaaatctgctattgagaacatgcctagc
atattgatagattctagttatgttgagttagaatctcattgtgcagtgtgtaaagaagcg
tttgaattaggatctgaagctagagaaatgccctgtaagcatatatatcattctgattgt
atactgccatggttgtcgcttagaaattcatgccctgtttgtagacacgaattgcctgct
gataacaacagtaatcagagcaatgttgatgagagtgataatggagaaaatgggcaatca
aatgaggatgaagctgtggggttaacgatatggaggttaccgggaggtgggtttgctgtg
gggaggttttcaggagggagaagaggcggtgagagagagttgccagttgtttatacggag
atggatggcgggtttaataacggaggtttgcctaggagggtttcgtggggttcaagaggg
agtagaggaagggagaggggtgggggatttgttgggaggtttgttaggagcttgtttggg
tgttttggtggtggttctggatcttctagtacgagtggtagttcggattctaggataaga
aggaggggaactagtagggcggtttcattgtttaacgtgtcttcgagaagaagtgcttgg
gatgtggatgttagtagtgaaggaagaagatggtaa
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