Citrus x clementina (clementine): CICLE_v10031733mg
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Entry
CICLE_v10031733mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v10031733mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CICLE_v10031733mg
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CICLE_v10031733mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
18045407
NCBI-ProteinID:
XP_006436898
UniProt:
V4SQU2
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MKRKREEEKSKANDSNSNGNGNGNGNSNNNMEIVWQTPANPPVKEDYIFRDGRRNVKPYY
FEFISHVKNRWAGKTIVDLFAEEFKGRPYDYYVSAVKCGRIQVDEEMVPVSYTVKSSQKI
SHFLHRHEPPVMAWDVSILQKEPDVLTVCKPPSVPVHPCGQYRKNTVVGILQAEHDLAPL
FPVHRLDRLVSGLLILARNASKADLFRQQIEAGKVIKRYIARVNGVFPEGEQVVDVNINY
NASAGRSTAESGDSLGDTPLKGKAACTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYT
GYPIANDMLYLCEHVTHREGMSADRAAAYSHHSPPPVSSDKSESSSEDFSIDPICTNCPN
LAPKGYEGHEEGLWLHCVRYSGPGWTYECPYPDWATLSL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagagagaagaagaaaagagtaaggctaacgacagcaacagcaacggcaac
ggcaacggcaacggcaacagtaataacaacatggagattgtttggcaaacgccagcaaat
ccaccagtgaaagaggactacatttttcgcgacgggaggcgcaacgtcaaaccgtactac
ttcgagttcatttctcatgtaaagaatcgctgggctggaaaaacaattgttgatttgttc
gcggaggagttcaaaggccgaccttatgattactatgtaagtgctgtcaaatgtggacgg
atacaagttgatgaagagatggtgccggtttcatacacagtaaaatcgtcgcaaaaaatt
agccacttcttacacaggcatgaaccaccagtgatggcttgggatgtttcaattcttcag
aaagaaccagatgtattgactgtttgcaaaccgccatctgttcctgtgcatccatgtggt
caatatcggaagaacacggttgtgggaattcttcaggcagagcatgacttggcaccccta
tttccggttcatcgactagatcgtcttgtctcaggactccttatcttggctagaaatgct
tctaaagctgacctttttagacaacagattgaagccgggaaggtgataaaacgttatatt
gcaagggtcaatggggtatttccagagggtgagcaagttgttgatgtaaacataaattat
aatgctagtgcaggaaggagcactgcagagtctggtgactcccttggtgatacgcctttg
aagggaaaggctgcttgtacaaagtttaccaggattagtaccaacggaactcatagcatt
gttttgtgcgaaccaatcactggccgaactcatcaaatacgtgtgcatttgcaatataca
ggctatccaatagccaatgacatgctttacctctgtgaacacgttactcatcgcgaagga
atgagtgctgatagagctgctgcttattcacaccattctccaccacctgtttcttctgat
aagtctgagagctctagtgaagatttcagcattgatcctatctgtacaaattgtccaaat
ttggctccaaaaggatacgaaggacatgaagagggcttgtggttacattgtgttcgatac
tctggacctggatggacatatgaatgcccttatcctgattgggcaacacttagcttataa
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