Citrus x clementina (clementine): CICLE_v10031777mg
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Entry
CICLE_v10031777mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10839
UV excision repair protein RAD23
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03420
Nucleotide excision repair
cic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CICLE_v10031777mg
09124 Replication and repair
03420 Nucleotide excision repair
CICLE_v10031777mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cic03051
]
CICLE_v10031777mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10031777mg
Proteasome [BR:
cic03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
CICLE_v10031777mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CICLE_v10031777mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
UBA_RAD5A
Rad60-SLD_2
CUE
Crinkler
Dsc3_N
Ubiquitin_5
TECR_N
Ubiquitin_4
UBA_7
Nucleo_P87
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
18044405
NCBI-ProteinID:
XP_006437672
UniProt:
V4TCA0
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MMKIFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVYPAAQQMLIYQGKVLKDDTTL
EENKVAENSFVVIMLTKNKRPTGEGSTTSTATTKAPQSSAPTPAVTPATAPQTAVPISTE
PTPAPTPAPASASVSSVSATSESGVYGHAASNLVAGNNLEGAIQQILDMGGGTWDRDTVV
RALRAAYNNPERAVEYLYSVSIAIFHHSFTHL
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagattttcgttaaaactctcaaaggaacttctttcgacgtcgaagtgaaacct
gaagacacggtctttgatgtgaaaatgaagatagaaactgttcaaggatcggatgtttat
cctgctgcacaacagatgctgatttatcaggggaaagtcctcaaagatgatactacactg
gaagagaacaaagtagctgaaaatagttttgttgttattatgttaacaaagaataagaga
ccaactggtgaaggttcaactacgtcaactgcgactacaaaggctccccagtcaagtgcc
ccaacccctgcagtgaccccagcaacagctcctcagactgccgtgccaatctctacagag
cctacacctgctcctactcctgctcctgcttctgcttctgtgtcatcagtttctgctacg
tcagagtctggtgtgtatgggcatgctgcatctaatctggttgctgggaacaacttggag
ggagcaatccagcagattcttgatatgggtggagggacttgggatagagatactgttgtt
cgtgctcttcgagctgcttataataatcctgagagggctgttgaatatttatattctgtg
agtattgctatatttcatcattctttcacacatttgtaa
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