Citrus x clementina (clementine): CICLE_v10032402mg
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Entry
CICLE_v10032402mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CICLE_v10032402mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10032402mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CICLE_v10032402mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
18045633
NCBI-ProteinID:
XP_006436265
UniProt:
V4TD27
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MDEGNNSGKGNTIGGIVDTSKWDRSMWLMKCPALVSRSLKIPSSDNDDDDSARPVAKVIL
SIDPLQSNEDSSSSSSSSSTRFTMELISTESGNAPKRYSMDMSKDLIPMSVFAESSNGKI
SVEGKIKNKFDMRPHHENMENYGKLCRERTNKYMTKSRQIQVIDNDNGSHMRPMPGMMIS
TGFTEKKKPQPKGSEVKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDML
KDLCVYNNKGSNQGSYELKPEYKKAADGPAS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggcaataacagcggcaaaggcaatacaattggtgggattgtggatacgagc
aagtgggatagatcaatgtggctaatgaagtgccctgcattagtctctcgctcccttaag
attccttcttctgacaatgatgatgatgattccgctcgccctgtcgccaaagtcatcctc
tccatcgaccctcttcaatccaatgaagattcttcatcgtcatcgtcatcgtcatctact
cggttcactatggaattgatcagcactgaatctggaaatgctcccaagcgttactccatg
gatatgtctaaagacttgattccaatgtccgtgtttgcagagtcatcaaatggaaagata
tctgtcgaaggaaaaataaagaacaaatttgacatgaggcctcatcatgagaacatggag
aactatggaaaactctgccgtgaacggacaaataagtatatgaccaaaagtagacagata
caggtcatcgacaatgacaatggatctcatatgaggcctatgccagggatgatgatttct
actggatttactgaaaagaagaaaccgcaaccaaagggatcagaagtgaaaagaacaaga
agggatcgtggagagatggaagacattatgtttaagctcttcgaaaggcaatcaaattgg
actttaagacaacttatccaagagactgatcaacctgaacaatttctgaaagatatgctt
aaggacctctgtgtctacaataacaagggaagtaatcaaggatcttatgagttgaagcca
gaatacaagaaagcagccgatggtccagcttcctaa
DBGET
integrated database retrieval system
