KEGG   Citrus x clementina (clementine): CICLE_v10032775mg
Entry
CICLE_v10032775mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K07887  Ras-related protein Rab-5A
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04144  Endocytosis
cic04145  Phagosome
cic04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CICLE_v10032775mg
   04145 Phagosome
    CICLE_v10032775mg
   04148 Efferocytosis
    CICLE_v10032775mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10032775mg
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cic04147]
    CICLE_v10032775mg
   04031 GTP-binding proteins [BR:cic04031]
    CICLE_v10032775mg
Membrane trafficking [BR:cic04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    CICLE_v10032775mg
 Endosome - Lysosome transport
    CICLE_v10032775mg
Exosome [BR:cic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CICLE_v10032775mg
  Exosomal proteins of other body fluids (saliva and urine)
   CICLE_v10032775mg
  Exosomal proteins of colorectal cancer cells
   CICLE_v10032775mg
  Exosomal proteins of bladder cancer cells
   CICLE_v10032775mg
GTP-binding proteins [BR:cic04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    CICLE_v10032775mg
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 TniB AAA_16
Other DBs
NCBI-GeneID: 18044974
NCBI-ProteinID: XP_006436475
UniProt: V4TDR2
LinkDB
Position
Unknown
AA seq 200 aa
MGCSGSVPARSSGQSGGLNNLENAGSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP
TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITSPD
SFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKT
ADNINQLFEVLITCTSSYCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcaggttctgttccagctaggagttctggccagtccggtggacttaacaac
ttggaaaatgcaggatcatctgatgcaaaaaacctacgtgttaagctggttctgttaggt
gattcaggtgttgggaaaagttgtattgttctccgctttgttcgtggccagtttgacccg
acatccaaggtaactgttggagcctccttcttgtcacagacgatagctttgcaagattct
acaacagttaagtttgaaatatgggatacagctggtcaagaaagatatgctgctctggca
ccactatattacagaggtgctgcagtcgcagttgttgtgtatgatataactagtccagat
tcattcaacaaagcgcaatactgggttaaggagctacaaaaacatggaagtcctgacata
gtcatggctttagttggtaacaaggctgatcttcatgagaagcgagaagtaccagctcaa
gatggcattgagtatgcggagaagaatgggatgttctttatcgaaacatcggccaagact
gcagataatataaatcagctgtttgaggtactcattacatgtacttcttcatattgtagc
tag

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