Citrus x clementina (clementine): CICLE_v10033565mg
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Entry
CICLE_v10033565mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10033565mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CICLE_v10033565mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Helicases
CICLE_v10033565mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
18044756
NCBI-ProteinID:
XP_006435811
UniProt:
V4TH30
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MESNPNKALTETRFSDLKPPLSERVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAAT
GSGKTLAFVVPLVEILRRASSARKPHQIMGMIISPTRELSSQIYHVAQPFISTLPDVKSM
LLVGGVVVKADVKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILVLDEADRLLDMG
FQKQISYVISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRIEASSQQLASSKTPLGLH
LEYLECESDKKPSQLVDLLIKNKSKKIIIYFMACACVDYWGVVLPHLAVLKSLSLIPLHG
KMKQTAWEKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTA
RLGRQGSSIVFLSPKEEAYVEFLRISRVPLQERKWSDDASDVVPEIRSAAKKDRDVMEKG
LRAFVSYIHAYKEHHCSYIFRWKELEVGKLAMGYGLLQLPSMSEVKIHSLSTKGFVPVKD
IKLEDIKYKQTIVQNLFCFQGKHAAQLAEFLLPLFSGKSREKQRKKNLQAKKEAQQQEPK
RQKPNKASDAATTVMRKKTAKQRRATQAIEDEDELARDYRLLKKLKKGSIEESEFAKMTG
TEELL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacccgaacaaagcgttaacagaaactcgcttttccgatttgaagccgccg
ctttccgagcgagttctcgaagccttagctgaagccggctttgagttttgcacgcctgtt
caagccgccacaatccctttgttatgcagctacaaggacgtagccgtggacgccgccacc
ggctctggaaaaaccctagcttttgtcgtccctttagtggagatcctccgccgtgcctct
tctgctcggaaaccccaccagataatggggatgattatctcaccaactagggagctatca
tcgcaaatataccatgttgcacagccgttcatctcaactttaccagatgttaagtctatg
cttcttgtgggaggtgtggtggtgaaagcagatgtgaagaaaatagaggaggaaggagca
aatttgttgatcggaacacctgggaggctatatgatataatggaacgtatggatgtcttg
gattttcggaaccttgagattttggttctagatgaggctgacaggctcttggatatggga
ttccagaaacagatcagttacgtcatatctcgcctgcctaaacttcgtagaactggcctt
ttttcagctacgcaaactgaggcagttgaagagctatccaaagcagggctgaggaatcct
gtgaggattgaagcatcatcccagcaactagcctcttcaaaaacacctttaggccttcat
cttgagtatttggaatgtgaatcagataagaaaccatcacaacttgttgatctgcttata
aagaacaagtctaaaaagattataatatatttcatggcttgtgcttgtgttgactactgg
ggagttgttcttccacatctggctgttttgaagagtctctctttgattcctcttcatgga
aagatgaagcagactgcttgggagaaagcattagcttcatttacatctctttccagtggc
attcttctatgtacggatgttgctgcacgtggacttgacattcctggtgttgattgtata
gtgcagtatgatccccctcaagatccaaatgttttcgttcacagagttggtcgaactgct
aggttgggtagacaagggagctccattgttttcctatcacccaaggaggaagcttatgta
gaattcctgcggataagtcgggttcctcttcaagagaggaaatggtctgatgatgcttct
gatgtagttcctgagattcgatctgcagcaaaaaaagaccgcgatgtcatggagaaaggt
ctcagagcatttgtttcttatatacatgcatataaagagcatcactgctcctatatcttc
aggtggaaagaacttgaggtcgggaaattggctatgggttatggcttactacaacttcct
tcaatgtctgaggtaaaaatccattctctttccaccaagggtttcgtcccagttaaagac
atcaagttggaggacatcaagtacaaacagaccattgttcaaaaccttttttgtttccaa
ggaaaacacgccgcacaattagctgaatttcttttgcctcttttttcaggtaaatcacgt
gagaaacaaaggaagaagaatttgcaagcaaagaaagaggcacagcagcaagaaccaaaa
cgacagaaaccgaacaaggcctcagatgctgcaactactgtgatgaggaagaaaacagca
aaacagagacgtgctacccaggcaatcgaagatgaagatgagctggctcgggattaccgt
ctactaaaaaagctaaaaaaggggagtatagaggaaagtgaatttgcaaagatgaccggg
acagaagagttgctataa
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