Celeribacter indicus: P73_0031
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Entry
P73_0031 CDS
T03575
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cid
Celeribacter indicus
Pathway
cid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P73_0031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cid03019
]
P73_0031
03400 DNA repair and recombination proteins [BR:
cid03400
]
P73_0031
Enzymes [BR:
cid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P73_0031
Messenger RNA biogenesis [BR:
cid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P73_0031
DNA repair and recombination proteins [BR:
cid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P73_0031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
DUF1707
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AJE44746
UniProt:
A0A0B5DVG7
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All DBs
Position
32639..34678
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AA seq
679 aa
AA seq
DB search
MDTAQALLSSVFGFDAFRPGQAEIVGAVVDGRDTLAIMPTGGGKSLCYQLPALVRDGLTV
VISPLIALMRDQVQGLQAAGVAAGALTSGNTDEETDAVFAALSRGELKLLYMAPERLASG
GTLPLLRRSGVTLIAVDEAHCVSQWGHDFRPDYLRIGELKRALGVPLAAFTATADEETRA
EIVTRLFDGRQPDTFLRGFDRPNIHLAFAVKDSPRRQILDFTRARKGQSGIVYCGTRAKT
ESLARALTEAGHLALAYHGGMEPDLRRDVERRFQQEDELIVVATVAFGMGIDKPDIRWVA
HADLPKSVEGYYQEIGRAGRDGAPAETLTLFGPDDIRFRRSQIDESPAPPERRAADHARL
NALLGLAEAQHCRRQTLLAYFGEAAEPCGNCDLCDTPPALFDGTTAVRKALSAVLRCDEG
FGAGHLIDVLTGKATDKVRQWTHDRLSVFGVGREYDKRQWNAIFRQMMGADLVRPNPERH
GALYMTEAAIPILKGEGTVTLRKDTLAVARKGPVAKALVSEEDAPLLSALKAKRRAFAEE
ARVPAYVVFADRTLIEMAEKRPATLDEMARIGGVGAKKLERYGEAFLSVILGAPAPEMHP
ARRKLSASGGGDLFDRLQDVHSRLTRGECGTLKPMSLTASQITKIVRQRPRDLDGFARLV
GERQAERFGPAMIEVLGSV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcgcaggcgcttctttcctccgttttcggcttcgacgcctttcgacccgga
caggcggaaatcgtcggggccgtcgtggacgggcgcgatacgcttgccatcatgccgacc
ggcgggggcaagtcgctctgctatcaactgcccgccctcgtgcgcgacgggctgacggtc
gtgatctccccgctcatcgcgctcatgcgcgatcaggtccaggggcttcaggccgcgggc
gtcgccgccggcgcgctcacctccggcaataccgacgaagagaccgatgccgtcttcgcc
gccctgtcgcggggggagctgaaactcctctacatggcgcccgaacggctcgcctccggc
ggcaccctgccgctcctgcgccgctccggcgtgacgctcattgccgtggacgaggcgcat
tgcgtctcccaatggggccatgatttccgccccgactacctccggatcggcgagctgaag
cgtgcgctgggcgtgccgctcgccgccttcaccgcgacggcggacgaggagacccgcgcg
gagatcgtcacgcgcctgttcgacggacggcaaccggataccttcctgcgcggcttcgac
aggcccaacatccacctcgccttcgcggtgaaggacagcccgcgccgccagatcctcgac
ttcacgcgcgcccgcaagggccagtcgggcatcgtctattgcggcacgcgggccaagacc
gaaagcctcgcccgcgcgctcaccgaggcggggcacctcgccctcgcatatcacgggggc
atggagccggacctgcgccgcgatgtcgagcgccggttccagcaggaggacgagctgatc
gtcgtggccaccgtcgccttcgggatgggcatcgacaagcccgacatccgctgggtcgcc
catgccgacctgccgaaaagcgtggaaggctattatcaggagatcggccgcgccggccgg
gacggggcccccgccgagacgctgaccctgttcggccccgacgacatccgcttccgccgc
agccagatcgacgaaagtcccgcgccgcccgaacgccgtgccgccgaccacgcccggctc
aacgccctcctcgggctcgcggaggcgcagcactgccggcgccagaccctcctggcctat
ttcggcgaggcggccgagccctgcggcaactgcgatctctgcgacacaccgcctgcgctc
ttcgacggtacgaccgcggtacgcaaggcgctgtcggcggtgctgcgctgcgacgagggt
ttcggcgcggggcatctcatcgacgtgctgacgggcaaggcgacggacaaggtgcgccag
tggacccacgaccggctttccgtcttcggcgtcggacgcgaatatgacaagcggcaatgg
aacgcgatcttccggcagatgatgggcgccgatctcgtgcggcccaacccggaacggcac
ggggcgctctatatgaccgaggccgcaatcccgatcctgaagggcgaggggaccgtcacg
ctgcgcaaggacacgctcgcggtggcacgcaagggcccggtcgcgaaggcgctcgtgtcc
gaggaggacgcgccgcttctctccgccctcaaggcaaagcggcgcgccttcgccgaggag
gcgcgcgtgccggcctatgtcgtcttcgccgaccgcacgctgatcgaaatggccgaaaag
cgacccgcgacactggacgagatggcgcggatcggcggcgtcggcgcgaagaagctcgaa
cgctacggcgaggccttcctgtcggtgatcctcggcgcgcccgcgccggagatgcacccc
gcgcggcgcaagctctcggcttccggcggcggcgatctcttcgaccggttgcaagatgtc
cacagccgcctcacgcgcggcgaatgcggcacgctcaagccgatgagcctcaccgcctcc
cagatcacgaagatcgtgcggcaacgcccccgcgacctcgacggcttcgcgcggctcgtc
ggggagcgtcaggccgaacgcttcggtcccgccatgatcgaggtgctcgggtctgtctga
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