Celeribacter indicus: P73_0428
Help
Entry
P73_0428 CDS
T03575
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cid
Celeribacter indicus
Pathway
cid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P73_0428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cid03019
]
P73_0428
03016 Transfer RNA biogenesis [BR:
cid03016
]
P73_0428
Enzymes [BR:
cid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P73_0428
Messenger RNA biogenesis [BR:
cid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P73_0428
Transfer RNA biogenesis [BR:
cid03016
]
Prokaryotic type
tRNA degradation factors
P73_0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AJE45143
UniProt:
A0A0B5DNI3
LinkDB
All DBs
Position
complement(432682..434814)
Genome browser
AA seq
710 aa
AA seq
DB search
MFNEVKKSIQWGEETLTLETGKIARQADGTVVATLGETSVMANVTFAKQQKEGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFAPGFKNEVLVMCTVLSH
DLVNDPDVVAMIAASAALTLSGAPFMGPIAGCRVGFEDGEYILNPTVDDMQDLRNNPDQR
LDLVVAGTKDAVMMVESEAYELTEDEMLGAVTFAHEQIQPVIDCIIDLAEEAAKEPFDFT
PPDYSDLYETVRKAGEEKMKAAYAILDKQERVAAVANVKEEIKAGLTEDQLENTNLGSAF
KKLESTVLRSSVVKDGKRIDGRALDQVRPIVCETGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQIIDALHGNFRSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAAVAGVAMGLVLEDDGSFA
ILTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVQGITPEIMKQALAQAKAGRMHILGE
MNKALSGAGEFSVHAPRIETMTIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKI
ASPNGDAIQKAYDMIYSIVAEPEEGKVYKGKVVKLVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVFVKLLGFDDRGKVRLGMKMVDQTTGEEVRKEEEAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaagtgaaaaaatctatccagtggggcgaggaaacgctcacgctggaaacc
ggcaagattgcccgccaggccgacggcaccgtcgtcgcgaccctcggggaaacctcggtg
atggccaacgtcaccttcgccaagcaacagaaagagggccaggacttcttccccctcact
gtgcattaccaggaaaaatactacgccgccggcaagatccctggcggcttcttcaagcgc
gaggcccgtccgacggaaaaggagacgctcaccgcgcgcctgatcgaccgtccgatccgc
ccgctcttcgcgccgggattcaagaacgaagtgctcgtgatgtgcacggttctctcccat
gacctcgtcaacgatcccgacgtcgtcgcgatgatcgccgcctccgcggccctgaccctc
tccggcgcgcccttcatgggtccgatcgccggctgccgcgtcggcttcgaggatggcgaa
tacatcctgaacccgaccgtcgacgacatgcaggatctgcgcaacaaccccgaccagcgc
ctcgaccttgtcgtcgcgggcaccaaggacgcggtgatgatggtggaatcggaagcctac
gagctgaccgaggacgagatgctcggcgccgtcaccttcgcgcatgaacagatccagccg
gtcatcgactgcatcatcgacctcgccgaagaggccgcgaaggaacccttcgacttcacc
ccgccggattactccgacctctacgagacggtgcggaaggccggcgaggagaagatgaag
gccgcctacgcgatcctcgacaagcaggagcgcgtggccgccgtcgccaatgtgaaggaa
gagatcaaggccggcctcaccgaggaccagctcgagaacacgaatctcggctccgcgttc
aagaagctcgaatcgaccgttctgcgctcctccgtcgtgaaggacggcaagcgcatcgac
ggccgcgccctcgatcaggtccgcccgatcgtctgcgaaaccggcatcctgccgcgcacc
cacggctctgccctgttcacccgcggcgagacccagggcctcgtggtgacgacgctcggc
accggcgacgacgagcagatcatcgacgcgctgcacggcaacttccgctcgaacttcctg
ctgcactacaacttcccgccgtattccgtcggcgaagtgggccgcgtcggctctccgggc
cgtcgtgaaatcggtcacggcaaactggcatggcgcgcgcttcaggccgtcctgcccgcc
gccaccgacttcccctacacgatccgggtagtctccgagatcaccgaatcgaacggctcc
tcctcgatggcctccgtctgcggcggttcgctgtcgatgatggacgcgggcgtgccgctc
aaggccgccgtcgcgggcgtcgccatgggcctcgtgctcgaggatgacggctccttcgcg
atcctcaccgacattctcggcgacgaggatcacctcggcgatatggacttcaaggtcgct
ggcaccgagaatggcatcacctcgctccagatggacatcaaggtgcaaggcatcacgccc
gagatcatgaagcaggccctcgcccaggcgaaggcaggccgcatgcacatcctcggcgag
atgaacaaggcgctgtcgggcgcgggcgaattctccgtccacgcaccgcgtatcgagacg
atgaccatccccaccgacaagatccgcgaagtgatcggctcgggcggcaaggtcatccgc
gagatcgtggaaacctccggcgccaaggtcgacatcaacgacgacggcgtgatcaagatc
gcctccccgaacggcgacgccatccagaaggcctacgacatgatctattcgatcgtcgcg
gagccggaagagggcaaggtctacaagggcaaggtcgtgaagctcgtcgatttcggtgcc
ttcgtgaacttcttcggcaagcgggacggcctcgtgcacgtcagccagatcgagaaccgc
cgcctgaaccacccgtcggatgttctgaaggaaggtcaggaagtcttcgtgaagctcctc
ggcttcgacgaccgtggcaaggtgcgcctcggcatgaagatggtcgatcagaccaccggc
gaagaagtcaggaaagaggaagaggccgagtaa
DBGET
integrated database retrieval system
