Celeribacter indicus: P73_3610
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Entry
P73_3610 CDS
T03575
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cid
Celeribacter indicus
Pathway
cid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P73_3610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cid03019
]
P73_3610
Enzymes [BR:
cid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P73_3610
Messenger RNA biogenesis [BR:
cid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P73_3610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
HEM4
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJE48325
UniProt:
A0A0B5E4N9
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All DBs
Position
3696489..3697781
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AA seq
430 aa
AA seq
DB search
MLGLKPKLLSVLDELGLDTPTPIQARAIPEVMNGRDVMGLAQTGTGKTLAFGLPLLHMAL
TDGSKPAPKTVRALILAPTRELVNQIADGLFPFIKGSHLKLNRVVGGVSINAQVNRLERG
TDILVATPGRLIDLIDRKAVRLDETTFLVLDEADQMLDMGFIHALRRLVPMLAKERQTML
FSATMNKQMNEIAQSYLSSPVRIEVSPPGKAADKIEQEVHFLPQPEKVTKLKDLLSEHPG
ELALVFARTKHGAERLSRQLERDGFKSGSIHGNKSQGQRERTIKAAREGQIDVMVATDVA
ARGIDIPLVRHVYNFELPNVPENFVHRIGRTARAGRDGKAVAFCAPTELDEFRAIEKVMK
LRIPIATPASWAADDVRAEPKPKPQGGGRRRGGGGGGRPGAAKAGAGQGQGQGQNRGRAK
ARRPRRKVEA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcctcaagccgaagcttctctccgtgctcgatgagcttggcctcgacacgccc
acccccatccaggcccgcgccatccccgaggtgatgaacggccgcgacgtgatgggcctt
gcccagaccggcaccggcaagacgctcgccttcggcctgccgctcctgcacatggcgctg
accgacgggtccaagcccgcgccgaagaccgtgcgcgcgctcatcctcgccccgacccgc
gaactggtgaaccagatcgccgacgggctcttccccttcatcaagggcagccacctgaaa
ctcaaccgcgtggtcggcggcgtgtcgatcaacgcgcaggtgaaccggctcgagcgcggc
acggacattctcgtggcgacgccgggccgtctcatcgacctcatcgaccgcaaggcggtg
cggctcgacgagacgaccttcctcgtgctcgacgaggccgaccagatgctcgacatgggc
ttcatccatgccctgcgccggctcgtcccgatgctcgcgaaggagcgccagacgatgctg
ttctcggcgacgatgaacaagcagatgaacgagatcgcgcagagctacctctcctcgccc
gtgcgcatcgaggtctcgcctccgggtaaggccgccgacaagatcgagcaggaggtccac
ttcctgccgcagcccgagaaggtcacgaagctcaaggatctgctctccgagcatccgggc
gagctggcgctggtcttcgcgcgcaccaagcacggggccgagcggctgtcgcgccagctc
gaacgcgacgggttcaagtccggttcgatccacggcaacaagtcgcagggccagcgcgag
cgcacgatcaaggcggcgcgcgaaggccagatcgacgtgatggtcgcgaccgacgtggcc
gcgcgggggatcgacattccgctcgtgcgccatgtctacaacttcgagctgccgaacgtg
ccggagaatttcgtgcaccggatcggccgcaccgcgcgcgccgggcgggacgggaaggcc
gtggccttctgcgcgccgaccgagctcgacgagttccgcgcgatcgagaaggtgatgaaa
ctgcgcatcccgatcgccacccccgcctcctgggcggccgatgacgtgcgcgccgaaccg
aagccgaaaccgcagggcggcggacgccgccgtggcggtggtggcggcggccgtcccggc
gcggcgaaggcgggagcaggccagggtcagggtcagggccagaaccgcggcagggccaag
gcccgccgtccccgccgcaaggtcgaggcgtaa
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