Ctenopharyngodon idella (grass carp): 127494109
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Entry
127494109 CDS
T08802
Name
(RefSeq) F-box and WD repeat domain-containing 11-A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04114
Oocyte meiosis
cide04120
Ubiquitin mediated proteolysis
cide04218
Cellular senescence
cide04310
Wnt signaling pathway
cide04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127494109
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127494109
04340 Hedgehog signaling pathway
127494109
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
127494109
04218 Cellular senescence
127494109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127494109
03036 Chromosome and associated proteins [BR:
cide03036
]
127494109
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127494109
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127494109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
WDR55
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
WD40_like
Beta-prop_IFT140_1st
F-box
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_VPS8
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR19_1st
WD40_2
Motif
Other DBs
NCBI-GeneID:
127494109
NCBI-ProteinID:
XP_051715678
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All DBs
Position
14:complement(24219113..24238597)
Genome browser
AA seq
572 aa
AA seq
DB search
MDPDMEDKTLELMCSLPRSVWLGCSSVAESLCALRCLQSLPSSRAHNQNITVMESQNNTD
DISPKKTTVFKLGNGSVAGSRKRPSQANYEKEKDLCIQLFDQWSESDQVEFVEHLISRMC
HYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCSAELVCREWQRVISD
GMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTNEVPPNSYYHSLYPKIIQDIETIE
ANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHT
GSVLCLQYDDRVIVTGSSDSTVRVWDVGSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDR
SIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN
GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA
YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL
NVSTNGQSEGRSPSRTYTCLFSVPVCPGRAES
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatccggacatggaggacaaaaccctggagctgatgtgttctttgcctcgttctgtc
tggctgggttgttcgtcggtggcagagagtctgtgtgctctcagatgcctgcagagcctc
ccctcctcccgcgcacacaaccagaacataacggtgatggagtcacagaataatacagat
gacatctcaccaaagaagacaacagtgttcaagttagggaacggttcagtggcgggttcg
aggaagaggccgtctcaagcgaactacgagaaggagaaagatctgtgcattcagctgttt
gatcagtggtcagaatctgatcaggtggagtttgtggagcatctgatctcacgcatgtgt
cattaccagcacggccatataaactcataccttaaacccatgttacagagagacttcatc
accgcgttgccagctcagggtctggatcacatagcggagaacatcctctcatttctagat
gctcgttctctgtgctcagctgagctggtctgtcgagaatggcagcgcgttatatcggac
gggatgctctggaagaagctcattgagaggatggtgcgcactgaccccctgtggaaaggc
ctgtcagagaggcatcagtgggagaaatatttatttaagaaccgaacaaacgaggtccca
cccaattcatactaccattcactctatcccaaaatcatacaggacattgagactattgag
gcgaactggcgttgtgggcgtcacaatcttcagcggattcagtgccggtcagagaacagt
aaaggtgtttattgcctccagtacgacgacgacaagatcatcagcggcctacgagacaac
tccattaaaatctgggacaaacagtctctggagtgtctgaaggttctgacgggtcacact
ggttcggttctgtgtctgcagtatgatgacagagtcatagtgacgggttcctctgattct
actgtcagggtgtgggacgtcggttctggtgaggttctcaacactctgatccatcataac
gaggcggttctgcacctgcgcttctgtaacggcctcatggtgacgtgttcgaaagatcgc
tccattgccgtgtgggacatggcgtccgccaccgacatcagtctgcgccgcgtgctcgtg
ggtcaccgtgccgctgttaacgtggtggactttgacgacaaatacattgtgtctgcgtct
ggagacagaaccataaaagtgtggagcaccagcacatgtgagtttgtacggacactgaac
ggtcacaagcgcggcattgcttgccttcagtacagagacagactcgtggtcagcgggtcc
tcagacaacaccatcagactgtgggacattgagtgtggtgcttgtctgcgtgtgctggag
ggtcatgaggagctcgtgcgctgcatcagattcgacaacaagaggatcgtgagcggagcg
tatgatgggaaaattaaagtttgggatttacaggcagctctggatcctcgggcccctgcc
agcacattatgtctgcgcacactcgtggagcattctgggcgtgtgttccgactgcagttt
gatgagttccagattattagcagttcccatgatgacactatccttatatgggacttcctg
aatgtctccaccaatggacagtcagaggggcgatcgccctcacggacatatacgtgcctc
ttctctgtgccagtgtgtcctgggagagctgagagctga
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