Ctenopharyngodon idella (grass carp): 127494110
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Entry
127494110 CDS
T08802
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127494110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127494110
03012 Translation factors [BR:
cide03012
]
127494110
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127494110
Translation factors [BR:
cide03012
]
Eukaryotic type
Release factors
127494110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
127494110
NCBI-ProteinID:
XP_051715682
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All DBs
Position
14:complement(24239616..24250514)
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AA seq
443 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPHNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTRDVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETSVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLETMRYVLRMHGAEVNGLENDEKVIHLTPEQEKDK
SHFVDKETGQEHELIEVMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGLDYQAEDDELFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatccgaacgcggcggacagaaatgttgaaatctggaagatcaagaaactc
atcaagagtctggaagcggcgagaggtaatgggaccagcatgatctcgctcatcattcct
cctaaagatcagatctccagagtggccaagatgttggcagatgagttcggtacggcgtca
aacatcaagagtcgagtgaaccgactgtcagtgttgggagccattacctcagtccagcag
agactcaaactctataacaaagtgcctcataatggtctggtggtttactgcggcaccata
gtgacagacgaaggcaaagagaagaaagtgaacatcgactttgagccattcaaacccatc
aacacctccctgtacctctgtgacaacaagttccacacggaggctctgacggcgttattg
tcagacgacagtaagtttgggttcatagtcattgatggtagtggggctctgttcgggact
ctacagggaaacaccagagacgtgctgcacaaatttactgtggaccttcctaaaaaacac
ggaagaggaggtcagtccgcgctgcgtttcgctcggttaaggatggagaagagacacaat
tacgtgaggaaggtggcagagacgtctgtgcagctctttgtgtccaatgataaagtcaac
gtggccggactggtgctggccggatccgcagattttaaaactgagctcagccaatctgac
atgttcgacccgaggttacaagcgaaagtgttgaagctggtcgacatctcttacggagga
gagaacggcttcaatcaggccattgagctctccgctgaagtcctgtccaacgtcaaattc
atacaggagaaaaagctgatagggcgatactttgacgagatcagtcaggacacagggaag
tattgtttcggcgtggacgacacactgaaggcgctggaaatgggagccgttgaaattctc
attgtctatgaaaacttggagacaatgagatacgtcctgagaatgcatggcgcagaggtc
aacggcttggagaacgatgagaaagtcattcatttgaccccagaacaagagaaggacaag
tcccacttcgtagacaaagagacgggtcaagaacacgagctcatcgaggtcatgccgctg
ctggagtggtttgccaatagctataagaagtttggagcgactctggagattgtgactgat
aaaagtcaagaggggtcgcagtttgtcaagggtttcggaggaatcggaggtattttgcgg
taccgagtggatttccaggggttggactaccaggcagaagatgatgagctttttgacttg
gatgattactag
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