Ctenopharyngodon idella (grass carp): 127494161
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Entry
127494161 CDS
T08802
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127494161
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
127494161
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
127494161
NCBI-ProteinID:
XP_051715777
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Position
14:complement(805836..887083)
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AA seq
1160 aa
AA seq
DB search
MASRGSDAGRHLPLQPHHHHHHHHTEPAPEPAVREAQRWIEAVTGRSFSDRDFRAGLDNG
ILLCELLSSIRPGLVKKINRLPTPVAALDNVALFLKGCEELGLKGSQLFDPGDLQDSSTR
TNKSPDNNKKLKHVLITIYWLGRAANSSASYNGPTLDLQEFEGLLSQMRKEAEEWDSPQR
SIRDSGYIDCCESERSDSLSPPRHTRDDSFDSLDSIGSRSHQTPSPDGLLARGYSDGRGS
DSECDTPQRKMPDVRKDDMLVRRTSYSEPRTAVPFNQYLPNKANQSSYMPAPVRRPRSDR
DDNCKSWSDTTSPVGGERPFSGSETLSLELSSVLTGSDVDCVESQQIDTESELQYSRASP
QNDSSPKDPISMNPQLSDPQIRSPLHPSVRPQPQEQNLSDREKMEEKERDGWATFCQIPL
NSTDPLQSDLQMSHNQTAGNDTRFRRSSSVFDDPESVSMIDMRSEEDSMLSPHSQVRHEL
MHNQYNELKEEEDHWQDDLAKWKSRRRSVSQDLIKKEEERKMMERLLSGDGGSQRRKSIK
TYREIVEEKERRERELHEAYRNARTPEEAASVLQRYVQRFTISEAVLERLKLPKLLERSV
SADPTRHSSFPISSDFSSAFSASSNPLQYLRQQSLPAAKFTSTVEARVTGYSTEQGNAGD
TECVSGPSRSNVTAPSLGPKPYRRTTAGMRTAKVDEVVRVNGEKEDEDHSIEEKGGRNRE
REEDCLQFFPSPYTDSDLTDPNVSDGSKVRPTELTLSSTHTPERCENDTETTEIEGGTVP
QVGDVSKSPEVLEIKPEETVTDQERIDETSDSLQTVIQMDNSSAQLKVNKLATEIPQNQS
KPSDPESYRTKPDMTEKGANVPPAVLNLVKRGEHFSWSPEEERKRQERWQREQERMLQEK
YRREQEKLKQEWEQAQKEVEEEERRYHEEERKILEETVTPLTPHSPTAPSVLPKAQSTLH
SQPEREHKQGPVEKQASSENCRRRENGLSEAAQRQTESLQMTVSSSPLQSCVSAGQRGRE
KPSTLQSDTPLANREQNETWNKNTSQPKPGGRKRSDSIENIGPNPSSSPSFTDTQAPPSP
NRSVSGKKLCSSCGHPLGKGAAMIIETLSLYFHIQCFKCGICKGQLGDTSTGTDVRIRNG
LLNCHQCYIRSRTAGQPTTL
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcgaggttcggatgcaggacgacatcttcctctgcagcctcatcatcatcat
catcatcatcacaccgaaccggcgccagaacctgctgtccgcgaggcgcagagatggata
gaggcggtgaccggcaggagtttctctgacagggacttcagagctggactcgacaacggc
attttactctgcgaactgctgagctcgatcagaccgggtctggtgaagaagataaaccgg
ctgcccactcctgtagctgctctggataatgtggcgctcttcctgaagggttgtgaggag
ttgggtttgaagggatcgcagctgtttgatcctggagatctgcaggactcctccacacgc
accaacaagagtccagacaacaacaagaagttaaaacatgttctgatcactatctactgg
ctgggtcgagcagccaatagcagcgcttcttacaacgggcccacgctggacctgcaggag
tttgagggactgctgtcacagatgagaaaggaagcagaggagtgggacagcccgcagcgc
agcatcagggacagcggttatatcgactgctgtgagtccgagcgcagcgactctctctcc
ccgccgagacacacgcgagacgactccttcgacagcctggactccatcggctcacgttcc
catcaaaccccctcgcccgacggcctgctcgcccgcggctacagcgatggccgcggcagc
gactcggagtgcgacaccccccagaggaagatgccggacgtgcgcaaggacgacatgctg
gtgcggcgaacttcctacagcgagccgcggaccgccgttcctttcaaccagtacctgccc
aacaaggctaaccagagctcatacatgcccgcaccggtgcgacgcccgcggtcagaccga
gacgacaactgcaaaagctggagtgacacgacctcacctgttggaggagagaggcctttc
agtgggagtgaaaccctttcgttagaactgtcctctgtgctaacaggaagtgatgttgac
tgtgtagagtctcagcaaatagatactgagtctgaactgcagtactccagagcgtctcct
caaaatgactcttctcctaaagaccccatttctatgaatccacaactcagtgaccctcag
attagatcccccctccatccttctgtccgaccccaacctcaagagcagaacctctcagac
cgtgagaagatggaggagaaggagagagatggatgggccactttctgccaaattcctcta
aactccacggatccccttcagagcgacttacagatgtcccataatcagacggcaggaaat
gataccagattcagacgttcatctagtgtgtttgatgatcccgagagtgtgagcatgatt
gacatgagaagcgaggaagactctatgttgtcaccccacagtcaagttcgacatgagctc
atgcacaaccagtacaacgagctgaaagaggaagaagaccactggcaggacgacttggcc
aaatggaagagtcgcagaaggagtgtgtctcaggacctgatcaaaaaagaagaggagagg
aaaatgatggagagactgttgagtggagatggaggatcacagagaaggaaaagcatcaag
acgtacagagaaatagtggaggagaaggagcgccgtgaacgagagttgcatgaagcgtac
cggaacgcccgcacaccagaggaagcagcttctgtgctgcaacgttatgtccagcgcttc
accatcagtgaggctgttctcgagcgcctcaaactccccaagctgctggagaggagcgtg
tcggctgacccaactcgccactcctctttccccatctcctcagacttctcctccgctttc
agtgcttcctcaaacccgctgcagtacctgaggcagcagtctctccccgcagccaagttc
acatccacagtcgaagcacgggtgacgggatacagcacagagcagggaaacgctggagat
acagagtgtgtttcaggtccatctcgctcaaatgtgacagcgccctctctcggtccaaaa
ccttacagacgcaccactgctgggatgagaacagctaaggtggatgaagtagtgcgagtg
aatggagaaaaggaggatgaagaccacagcattgaggagaagggaggaagaaacagagag
agagaagaagactgtctgcagttcttcccgtctccttacacagactcagacctcacagat
cccaatgtgtccgatggatccaaggtccggcccacggagctgacgctctcatccacacac
acaccggagcgctgcgagaacgacacagaaaccacagagattgaaggagggacagtcccg
caggtcggcgacgtctctaaatccccagaagtgttggagataaaaccagaagagactgtt
acagatcaagagcggatagatgagacgagcgactctctacagaccgtcattcagatggac
aactcttctgcacagttgaaggtcaataaactagcaacagagatccctcagaatcaatca
aaaccatctgacccagaatcatacagaaccaaaccagatatgactgagaagggtgcaaat
gtccctcccgcggtgctgaatctggtgaagcggggtgaacacttttcttggagccctgag
gaagagcgcaagcgtcaggagaggtggcagcgagagcaggaacgcatgcttcaggagaaa
tatcggcgtgaacaggagaagttaaagcaggaatgggagcaggcgcagaaggaggtggaa
gaggaggagaggcgctaccatgaggaggagaggaagattctggaggagaccgtgacccct
ctgacccctcactcaccgaccgcaccctcagtccttcccaaagcccaaagcactttacac
tcccagcccgagcgggaacacaagcaggggccggtggagaaacaggcgagctctgagaac
tgcagacgaagggaaaacggcctcagtgaggcagcgcagagacagacagagagtttacag
atgacagtaagcagttctcccctgcagagctgtgtgtcagcgggtcagagaggacgagag
aagccgtcgacactgcagtcagacacaccactggccaacagagagcagaatgagacctgg
aacaagaatacatcacaaccaaaacctggtggacgcaagaggtctgactctatagagaac
attgggccaaatccatcaagctcaccttcattcacagacacacaagcacctccatcacca
aacaggtctgtcagtgggaagaaactgtgttccagttgtggtcacccacttggcaaagga
gccgccatgattatagagactctcagcctttacttccacatccagtgctttaagtgtggg
atctgtaagggtcagctgggcgacaccagcacaggaacagatgtgaggatcaggaacggt
ctgctcaactgtcatcagtgctatatccgctcgcgcactgctggtcagcccaccaccctg
tga
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