Ctenopharyngodon idella (grass carp): 127494233
Help
Entry
127494233 CDS
T08802
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a isoform X1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127494233
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127494233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
Ig_2
LRR_14
ig
V-set
LRR_5
C2-set_2
LRR_9
fn3
LRRNT
Motif
Other DBs
NCBI-GeneID:
127494233
NCBI-ProteinID:
XP_051715917
LinkDB
All DBs
Position
14:7086759..7094608
Genome browser
AA seq
643 aa
AA seq
DB search
MYRLLVAQVLLGCWSVAQPFCPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPVDTV
KLRVEKTAVRRVPTEAFYYLTELRYLWITYNSITSVDPGSFYNLKVLHELRLDGNMIATF
PWESLKEMPSLRTLDLHNNRLTSVPVEAAPYLVNITYLDISSNKLTTLPSDLVDIWPPFS
GVLPSANASQKTVLGLQDNPWYCDCRISKLIELSKMTSIPVVLMDQFLLCSGPENLAGVL
FQRAELDQCLKPSVMTSATKITSSLGSNVLLRCDATGFPTPTLSWTRADGSAFNNTVVQQ
SPGEGVHWSILSLHNIVFKDAGDYLCKAKNVAGKAEASITLSVDGMQTTTQSPPINITKL
PNSQPVTSFAGTRMPLYTSLSPALTTRAAMTTMPLLPTRKSLGPGEGVQRSPPAGDKPTK
IQQSKGGKGLMMSDKFKKKADLKDIEVVEETSDTAVLLWTAEGFPSDAPLTVVYFPYDAK
DDKESVDTVVGQGKLLLEYLMPNQLYTVCLVTKGSVSGKEQCVDFSTLDNGGDDGQNKVL
MIASAIACAVAVPLIVVLLYKILCLYCKKNSSRNNGPDDDLSKETYVKFETLTMKQRTLN
GQANDLWARRQTQESERMLLCSRSSIDSQMTYKSDSSRSEYLC
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtctgctggtggcccaggttctcctgggctgctggagtgtggcacaacccttc
tgtccttcccagtgcacttgtgtgtaccacggacgcagcgatggcactggcagcaggtct
gttctatgcaatgaccctgacatgtcagatattccagtcaacgtccccgtggacacggtg
aagctgcgggtggagaagacagctgtgcgtcgagtgcccactgaggccttctactacctg
acagagttgcgctacctgtggataacatacaattcaattacctctgtggatcctggcagt
ttctacaatctgaaagttcttcatgagctacggctggatgggaacatgatcgctaccttt
ccctgggagtctctgaaagagatgcccagtctgaggaccttggacctgcacaataaccgc
ttgactagtgttcctgtggaggcagcaccttacttggttaacatcacctacctagatatt
tctagtaacaagctaactaccctcccttctgacctggtggacatctggcctccattttca
ggcgtcctgcctagtgccaatgcttcgcaaaagactgttcttggtctgcaggacaatccc
tggtactgtgactgtcggatttccaagctcattgagttgtccaagatgaccagcatacct
gtggtgttgatggatcagtttctgttatgcagtggaccagagaacttagctggtgttctg
ttccagcgggctgaactggatcagtgcctcaagccatcagttatgacttcagccactaag
atcacttcatcactaggcagcaatgtgcttctgcggtgtgacgccactggttttcctacc
ccaaccctttcctggaccagagctgatggatctgcattcaacaacacagttgtgcagcaa
tctccaggtgagggggttcattggtccatcctcagtttgcacaacatcgtgtttaaggat
gcaggcgattacctctgtaaagccaagaatgtcgcaggaaaggccgaggcatccatcacc
ctgtctgtggatgggatgcagaccacgacgcagtccccaccgataaacataaccaagctg
cccaatagtcaacccgtgacttcttttgcagggactaggatgccattgtatacttcctta
agccctgcgctcacaaccagagctgccatgaccacaatgccactgctgccaaccaggaag
agtctgggaccaggcgaaggagttcagaggtccccacctgctggagacaaaccaactaag
atccagcaaagcaagggcggcaaaggtttaatgatgagtgacaagttcaaaaagaaagct
gaccttaaagacattgaggtagtggaggagacaagtgacacagcggtcttattatggacc
gctgaaggtttcccaagcgatgcgcccctaacagtggtctactttccatatgatgcgaaa
gacgataaggagtcagtcgatacggtagttggtcaaggaaagctgcttttggagtatctg
atgcctaaccagctctacacggtgtgtttggttactaagggttcggtgtctgggaaagag
caatgtgtggatttcagtactctggataacggtggagatgatgggcagaacaaagtcctg
atgatcgcaagcgcgattgcatgcgcagttgcggtgcctctcattgtggtgttgctctac
aagatcttgtgtctgtactgtaaaaaaaacagtagtaggaacaatggaccagacgatgac
ctttcaaaagagacatacgtaaagtttgagacgctcaccatgaaacaaaggactctgaac
gggcaagcgaatgatttgtgggcacgaaggcagactcaggagtcagagaggatgctcctg
tgctcacgttcaagcatcgactctcagatgacgtacaagagtgacagctctagatctgag
tacctgtgctaa
DBGET
integrated database retrieval system
