Ctenopharyngodon idella (grass carp): 127494310
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Entry
127494310 CDS
T08802
Name
(RefSeq) matrin-3-like
KO
K13213
matrin 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127494310
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127494310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
127494310
NCBI-ProteinID:
XP_051716045
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All DBs
Position
14:complement(3787558..3806561)
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AA seq
1120 aa
AA seq
DB search
MSHKRTGDDAQKGFSVARGLLGDFSMGETHSDPYSSSSRSHSGMSGLVGGEEKDHNSQLH
RRAGSHLTTLKLFASLGLSPTDLDALAQVPEENICMENLPHLLMLLKNHKMEASWDDMQG
GRLDCSSGQAQSLSQGDFGYTSMQETSGRGYDMLDYRSGSGRDRQYSELSRDSYRSLGMS
ASSASDDLFMQRRMGTPSQRKVQDFLGVMPLMFPHVCSLCDFDVLSVMEWTQHTTGIRHS
ENRKLLLQMYPDWDPPMPSSLMSTSLSLDTKSCSDGLLGTDSIGGGLQRTGMSSNWGSDS
SMGMTSKRTSYSAAPKIKSRVIVLKYERKPKLTNSLFDLAKPFGTICKHLVLKNMNKAFL
ELQTHEEALAMANYYKRKPAILNGKEIQVYLSKELMAIKKSGRPDRDTRIREKKDVSKVV
FFCNLPRDSDKKKELLTISRRFGTVEKHFFLNKDAYVQMSKAEDAEMLVKYYTANPLTIN
GRSIRLNICSKYKTLTVPPGNGDQGREEPSRKSRDSRDSRNSRSSRSSKSATSRTTDKHS
SKNQRSSTSKAKESSDEKEEEPKPEEAEAVGDGSGDDEADVMEACDEDEEEFDEDASPDD
VDLSCDPEQTSEQAPDIDDSNIEDEEDPEAQQARDPSSDETTENQKDSGEKQEETQPEEP
ATSEAEQENTDELPKDLEEQNDDQPEDEGAEEDDEEQEGQTEDDFPENMDEFVTLDELVE
EEENAKRRDSKSKAKNTSESSRDSRGFRVVNVVGFKRGHGYVDEILTLAKPFGKVVRHLV
LDVRPEAFLQFSKEKEAREMVSFYTRNALPSVCGRPVRVYHSHTYATIQSGRVIYVGNVP
TFKGSDALLLKIAEPFGKIRKYYLNRLRNECFIEMERGEDAEKMAEAYKLKGPKFEGRRL
VVYVSRKFKQLKRGHRPPTPEPEDKRPLKREHSKEDEAQRNSSGKSKDKKEEEPSVKKIK
VDEPVADKAEEMESQEEKESQNVSAETVPEEKKEQEEEQSKDTSELQNIETEPKPEDEET
VDSSTVVSEKSVKTEETNITAAPSETKLETSHSTLEPYDPKVPVGVEFVKMGYYCRVCFL
FYSNEDTAKKIHCSSQAHYDKLKKYLEKEKTKAQSNGTKK
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcccataaacggactggtgatgatgctcagaagggcttttctgtagcccgtgggctt
ttgggtgactttagtatgggtgagactcactcggacccctacagctcatcttcccggtca
catagtggcatgtctggtctggttggaggggaggaaaaagaccacaactctcagctgcac
cgccgagcgggcagccaccttactacccttaaactgttcgccagcctaggtctgtcgccg
actgatctggacgcactggcgcaggttccagaggagaacatatgcatggagaacttgccc
catcttctcatgctgctgaagaaccacaagatggaagccagctgggacgacatgcagggc
ggaagattggactgttccagtgggcaggcacaaagcctctcacaaggtgacttcggttat
acttccatgcaagaaacatctggtcgagggtacgacatgttagattacaggagcggtagc
ggcagagaccgccaatattccgagctttcccgtgactcctaccgcagcctcggcatgtca
gcgtcatcggcatctgacgacctgttcatgcagagaagaatgggcaccccgtctcagaga
aaagtgcaggatttcttgggagtcatgcccctcatgtttccccatgtgtgctctctttgt
gattttgatgtgctctctgtcatggaatggactcaacacaccactgggattcgtcactct
gaaaaccgcaaactccttctgcaaatgtacccagactgggatcctccaatgccctctagt
ctcatgtcgacatccctttccctggacacaaagagttgttcggatggattgctgggaaca
gattcaattggtggtggactacagagaacagggatgagctctaactgggggtctgattcc
agtatgggaatgacaagtaaaaggacgtcatattcagcggcacccaagataaaaagtagg
gtgatcgtgttaaaatacgaaaggaaaccgaagttaacaaacagcctgtttgacttggca
aagccctttggcaccatctgtaagcatctagtgctgaagaacatgaacaaggctttcctg
gagctgcagactcatgaggaggctttggccatggctaattattacaagcgtaaaccagcc
attttgaatggaaaagagatacaagtttatttatcaaaggaactgatggcaattaagaaa
agtggaaggccggacagagacactaggatcagagagaagaaagacgtcagcaaggtggtg
tttttctgtaatttgccacgggacagtgacaagaaaaaggagctcctcacaatatctcgt
agatttggcactgttgagaaacatttctttctaaataaagatgcttatgttcaaatgagc
aaggctgaggatgcagagatgttggtgaagtactacactgccaatccattgactatcaat
ggaagatccattcgactgaacatctgctcgaagtataagactctaacggtcccaccagga
aatggcgaccaaggaagggaagaaccttcccggaagagcagggatagcagggatagcagg
aatagcaggagtagcaggagtagcaaaagtgccaccagcagaactactgataaacattca
tcaaagaatcaaaggtcctctacttccaaagccaaagagagctctgatgagaaagaagag
gaaccaaagcctgaggaggcagaggccgtgggcgacgggtcaggagatgatgaagctgat
gttatggaagcatgtgatgaagatgaagaggagtttgatgaagatgcatctccagatgat
gttgacctatcctgtgatccagagcaaacaagtgaacaagcaccagatattgatgattcc
aacatagaggatgaggaggaccctgaagcacagcaagccagagatccctccagcgacgag
accacagagaaccaaaaagactctggtgaaaaacaggaagagactcagccggaggaacct
gcaacatctgaggctgagcaggagaacacagatgagcttcctaaagacctcgaggaacag
aatgatgaccaacctgaagatgagggtgctgaagaggacgatgaagagcaggagggtcaa
accgaagatgactttcctgagaacatggatgagtttgttactctggatgagctagtggag
gaggaggagaacgctaagagacgagactcaaagtccaaagctaaaaacacatcagaaagc
tccagggatagtagaggatttagagttgtgaatgtcgttgggtttaaacgtggccacggt
tatgtagatgaaatccttactcttgccaagccttttggtaaagtggtgcggcacctggtc
ttggacgtgaggcctgaggcctttttgcagttctccaaagaaaaagaggcaagagaaatg
gttagtttctacactaggaatgccttaccatctgtgtgtggaagacctgtgagagtttat
cattcacacacctatgcaaccatccagagtggcagagttatctatgttggtaatgttcca
accttcaaaggctcagatgctttacttctgaaaattgcagaaccatttggaaaaatcagg
aaatattatctaaatcgattacgcaatgagtgcttcattgagatggaaagaggggaagat
gctgagaaaatggcagaggcctacaagttaaagggacctaaatttgaaggtagacgactg
gttgtctatgtaagcaggaaatttaagcagctcaaacgtggacataggcctccaacccca
gaacccgaggataaacggccactcaagagagaacactccaaagaagatgaggcacagagg
aactcctctggcaaaagtaaggacaaaaaagaggaagaaccttctgtcaagaagatcaaa
gtggatgagcctgttgctgataaagctgaggagatggagagtcaggaagagaaggaaagc
caaaatgtttctgcagaaaccgttcctgaggaaaagaaagagcaagaggaggaacaaagc
aaagacacatcagagctccagaatatagagaccgaacctaagcctgaagatgaagaaact
gttgattcttccactgttgtgtcagagaagagtgtgaagactgaggaaacaaacattaca
gcagcaccgtctgaaacaaagcttgaaactagccattctactctagagccatatgatcct
aaagtcccagtgggtgtggagtttgtgaagatggggtactactgcagagtctgcttcctg
ttttactctaatgaggacactgctaagaaaattcactgcagtagccaagcacactacgat
aaacttaagaaatatttggaaaaggagaaaaccaaagcacagagtaacgggacgaagaaa
tga
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