Ctenopharyngodon idella (grass carp): 127494320
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Entry
127494320 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
cide04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127494320
04120 Ubiquitin mediated proteolysis
127494320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127494320
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127494320
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127494320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
127494320
NCBI-ProteinID:
XP_051716063
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Position
14:complement(4627258..4635466)
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AA seq
616 aa
AA seq
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MVRAALVTAVSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVILYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAAAQAPAPAAPANAP
VPPPVNVAPGMMPQFPPGLFPFWGPFPGAPPPAAPGAQAATDTPQTSTDGTQAQGSESGA
SSSSQPTADSASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNTAEASASA
NMESTPSTSNTETPSQENEAQSGESVNGATGFSRPDSTTEEDNDRKEGDEDDGEPSAAEL
RRRRLRKLETTQTPDH
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcggctcttgtgacggccgtcagtttggctctgactggcgcggtggttgct
catgcctactttctcaagcaccagttctacccgactgtggtgtacctcaccaaaagcagc
cctagtatggcagttttatacattcaggctttcgtgttggttttccttttggggaaatta
atgcggaaggtctttttcgggcaattaagagctgctgaaatggagcacctgattgaacgc
tcgtggtatgcagtgacagagacctgcttagcctttacagtcttcagggacgatttctcc
cctcgctttgtggcccttttcactttgctgcttttcctcaagtgcttccattggctggct
gaagacagggtggattttatggaaaggagtccaaatatctcttgggtcttccacttcaga
gttctctctctaatggtgttgctgggagtattagactttctgtttgtcaatcatgcgtgt
cacagcattataacgagaggggcatcagtgcagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctcaccaccttcatcaagtacaccttacacacaattgatctgcag
agtgagaatccatgggacaataaagccgtctacatgctgtacacagagctcttcacagga
ttcatcaaggtgatattgtacatggcgttcatgaccataatgataaaagtgcacaccttc
cctctgtttgccattcggcccatgtatctcgcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaacatgaatactctctatccagatgccacc
cctgaagacttgcaagccactgacaatgtgtgcatcatttgcagagaagagatggtgact
ggagccaagaaactgccgtgcaaccacatatttcactcgagttgccttcgctcatggttc
caaagacagcagacatgtcccacctgtcgtatggatgtcctccgagcatcccagccaaac
cagactccagccccagcggctgcacaagcacctgcccctgctgctcctgctaatgccccc
gtacctccacctgtcaatgttgctccaggtatgatgcctcagtttcctcctgggctgttt
ccattttggggtcccttccctggcgcacctcctcctgctgcccctggtgcacaggcagct
actgacactccacagaccagtaccgatggaacgcaggcacagggatcagaatcaggagcc
agcagctcaagtcagccgactgcagacagcgcctctgctgctcctggagcgatgcctgga
ttccccttttccatgccgccacctttcccatcagctccatggctgccgatgcctccacct
ccaccttttatgtcatccatgccaccgccaccgtcaactctgtccacaatgtcagaggct
gagctcagagaactggagcaggagggcaggcgaggtttggaagccaggttgcagtgcctt
cacaacattcacacattgttggatgccgctatgcttaacattcaccactacctcagcacg
gtggctacattaagtcctccaagatcagaaaccaacactgctgaggccagtgcatcagcg
aatatggagtccacaccctccacgagcaacacggaaacccccagtcaggagaacgaggct
cagagtggtgaatctgtaaatggagctacaggcttttctcgaccggactcaaccacagaa
gaggacaatgacaggaaggagggagatgaggatgacggcgagccgagcgccgctgagttg
agacggcgtcgcctccgtaaactggagaccacgcagactcctgaccactga
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