Ctenopharyngodon idella (grass carp): 127494351
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Entry
127494351 CDS
T08802
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127494351
Membrane trafficking [BR:
cide04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127494351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
TPR_MalT
TPR_10
SH3_9
TPR_NPHP3
SH3_2
HEAT_Nup120
TPR_14
ChAPs
Motif
Other DBs
NCBI-GeneID:
127494351
NCBI-ProteinID:
XP_051716117
LinkDB
All DBs
Position
14:complement(7970057..7985415)
Genome browser
AA seq
1451 aa
AA seq
DB search
MACCCCCPIPCLRNCFPFSAISPAELDALWNDPPYTLAAVSELFPPNDAMTADEEAEAEA
EVEAEVRSREIYWRRKETFSGSSTISSAGERFSPDVVLLFSGRRRSSVSPDGELQEALRT
RLRVVESNSQDVVQLFKDLSARLVSVHAEKDSFVITFKTVEEIWKFSTYLALGYVARCLE
NFLCDQSFWLDPALLSDVEICVTVDEDHLATLYLGLLLQEGTFFAKTLYNSDCKEEEEEL
TYRRNDLVMVKDIGQEAMWEGTLLSTGQHGVVPVHDMQPLPYPFYQWFLKKYPGNAGGIP
VTEGLFDHPVVVGTCVAVVDHYPKGKDELHLRQGDLIKIEGFLLNTLNMFIGRHLTSGEM
GFVHKAHVKPENIEPLDGQLVFLSKEERAALSKLNPCLEPSQSDVLANLFSTDISTVYRL
DRLDDSDFTYIRNHPMSAEQKTTVDQRKSTISEKSDVTPYHSSPRQSFYASRNHLDRDSE
ILSFSLEDTFREMDEYEEDPPNFMDEGIWEADEAERCDPILTLLNLEYFQDTFQTLYDLS
YSFLDTFFNGLPEDEVLQHLENLREGAKKGRMLWAHRRACFLLGRLCAKKLKFSQARVYF
EEALKVPVNGFDDKPLLIALYTNLTAVYLKQKMMDKLPFTLEKASALILCLPCHNFCSVD
EFELLKPIMRKAIIEKDKCLEARVCYLSLCLFIRLRKIEDALPFVERLQFLTMTLSVEEG
RPTAPIDLNWMLCRLYHKKYLPYLTLASLSLDSGQEHSLDDAFQKIELFIKNSARLNPHW
KESNSVLPAQVVVYLQQALSIASQGEDLRTQRDLCLSLASVYQQHGALMKAVPFAQQAAQ
TGSQINEEEGFEASILLAWLLVLTEEPIQAQNTLHPLLKSLNETDSPTQRGVVYNLLALC
LHKQGRVQEAARNFHCALQISRENGNKRNEALALANLGCLSLSVGASGLAECFLLNSLHL
FQFLSESPTDQEHVQALLWLGRSYKDRGGSQEVRICFEMGLLIAISANNLHSQMVVAKVL
SRHYADLLLYGQCIVYYEHCVGLCRTLKNKQLEGEYLELLSNLYLSLNTEKSSRKSLDYS
KQSLRISIDLGKRQEESETWLQVGRIYYLIHEDELADMYLQAAVKTALRMNDPCFALSIY
EEAGDVFFKGHRNQLAALPFYRDGSLPFARSIKDVHSEFRLLSKLTELLMKQKQYEEALQ
YATLAVQVSTTTAVPLNERVSFHRLASVYFALGKYEMAENYYLKSLSLCPTALEHAIEVR
YYAKVYCRLADLTLYRLKDAFDAMGYYHLALAAALEDKESLSTLYIIYMKLAEIHANHMP
DAELCKNYMDRAQSLRRELAGYTDSSDTEETHQDLAEAASDIQTKAGQSDSSSGTSTLTE
SSMTDTSLTIDAQKESELILSNLSHKEDTDTNISEETDTGPADNISPETSCPDNTNHIHE
SRMKEGLTILL
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctgctgctgctgtccaattccgtgcctcagaaactgctttccattttcagcg
atatcacccgctgagctcgatgccttatggaatgaccctccatacactttagcagccgtc
agtgagctctttccgcccaatgacgccatgaccgctgatgaggaagcggaggctgaggcc
gaggtggaggcagaagtcagaagcagagagatttactggaggaggaaggaaacattcagc
ggaagcagcacaatatcttcagcaggagaacgcttctctccagatgttgttttgttgttt
agcgggaggcgacgatctagtgtatcacctgatggtgagcttcaggaagcgttacgtacc
agactccgagtagtagagagcaacagtcaggatgtcgtccagctcttcaaggatctgtct
gcacgactagtgtctgttcatgctgagaaagacagctttgtcatcacctttaagactgtc
gaggagatctggaagttctccacttacttggcactcggttatgtagcgagatgtcttgaa
aactttctctgtgaccagtcattctggctggaccctgcattactgagcgatgttgagatc
tgtgtaacagtggatgaagaccacttagctactctgtacttaggacttctgctacaggaa
ggtacattctttgccaagactttatacaacagtgactgcaaagaggaggaagaggagctg
acctacaggaggaatgacctggtcatggtgaaagacataggacaagaggccatgtgggag
ggtacgctgctgtccacgggccaacatggtgtagtccctgtgcatgatatgcagcctctg
ccttatccgttttatcagtggttccttaagaaatatcccggaaatgcaggagggattcca
gttacagaaggcctctttgatcatcctgttgtggtggggacctgtgtggcagtagtggac
cattacccaaagggtaaagatgagctgcacttacgccagggagacctaatcaagattgaa
ggatttcttctcaatactctgaacatgttcataggaagacacctcaccagtggagagatg
ggatttgttcacaaggcccatgtaaaacctgagaatatcgagcctctcgatggacaattg
gtctttctgagtaaggaggaaagggcagccctatctaaacttaacccttgccttgagccc
tctcagtctgatgtactggcaaatctattctcaactgacataagcactgtgtacagattg
gatagacttgatgactctgatttcacttacataagaaaccatccaatgtcagcagagcag
aaaactacagtggatcaaagaaagagcaccatatctgaaaagagtgacgtaactccctac
cactcatccccacggcaatcattctatgcctctcggaatcatctggaccgggactctgag
atcctctctttcagcctggaggacacctttagagagatggatgaatatgaggaagaccct
ccaaacttcatggatgaaggtatctgggaggctgatgaagcagagaggtgtgacccaatc
ttgaccctcctcaacctggaatatttccaggacacttttcaaactctttacgacctttct
tactctttcctggacactttcttcaatggccttccagaagacgaggtccttcaacatctg
gaaaacttgcgggaaggagccaagaaaggcaggatgctctgggcccaccggcgagcctgc
ttcctccttggccggctatgtgccaagaaactaaagttctcacaagcacgagtgtacttt
gaggaggctctaaaagtccctgtaaatggttttgatgacaagccacttctaattgccctg
tacactaatcttactgctgtttacctcaaacagaagatgatggacaagctgccattcacg
ctggagaaggcaagtgctctgattctgtgtcttccctgccacaacttctgctctgtggat
gagtttgaactactgaaaccaatcatgcgcaaagccataattgaaaaagacaagtgccta
gaggctcgggtatgctacctctccctctgtctcttcatccgtctaaggaaaatagaggat
gctttaccttttgtagagaggcttcagttccttaccatgacactgtctgtggaagaaggg
aggccaactgctccaattgatctcaactggatgctgtgcaggctttatcataaaaagtat
ttgccctacctcacactagcttctttaagtctagactcagggcaagagcattccttggat
gatgcattccagaaaattgaactctttatcaaaaactcagcaaggcttaatcctcactgg
aaggaaagtaattctgtgcttcctgcacaggtggtggtttaccttcagcaggccttgtcc
atagctagtcaaggggaagacctgaggactcaaagggacctgtgcctgagcctagctagt
gtttaccagcagcatggagctctaatgaaggccgtgccctttgcccaacaggcagcacaa
actggaagtcaaattaatgaggaggagggcttcgaggcatccatactgctggcctggctc
ttggtattaacggaggaacccatacaagctcagaacactctgcaccctctgcttaagtct
ttgaatgaaacagacagtccaacacagcgtggtgtagtctacaatctcctagccctatgc
ctccacaaacagggcagagttcaggaggcagcaagaaactttcattgcgctctgcagatc
tcccgagagaatggaaacaagcgtaatgaagcactagctctggctaacttgggttgcttg
tccctgtctgtaggagcttcgggcctagcagagtgtttcctgctcaattccctgcaccta
ttccagtttctctcagagagccccacagatcaggagcatgtccaggctctgctctggctg
ggcaggagctacaaggatagaggagggagtcaggaagtcagaatatgctttgagatgggc
ctcctcattgctattagtgccaacaatctgcacagtcaaatggttgtggcaaaagttcta
agtcgacattacgctgacttgctgctgtatggacagtgtattgtttactatgagcactgt
gtgggcctgtgcagaacactgaagaataaacagctagaaggagagtacctggaactcctc
agcaacctctatctctcactcaacactgagaagtcatcgaggaagtctcttgattactca
aagcaaagcttaaggatctccatagacttgggaaaaagacaggaagagtcagagacatgg
ctgcaagtgggccgtatctactatctgatccatgaagatgaactggctgacatgtaccta
caggcagcagtaaagacagccctgaggatgaacgacccatgttttgctttgagcatttat
gaggaagcaggagatgtgtttttcaaaggacacagaaaccaactggctgccctacctttt
tacagggatgggagtttgccatttgcacgcagcattaaagatgtgcactcagagttcagg
cttttgagtaaactcacagagctcctgatgaagcagaagcagtacgaggaagcactgcag
tatgccacactcgcagtgcaggtcagcaccacaactgctgttcctttgaatgagagagtg
tccttccatcgtcttgcatcagtgtacttcgctctagggaagtatgagatggctgagaac
tactacctgaagtctctttcactctgccccactgcacttgaacatgctattgaagttcgg
tactatgctaaagtgtactgcagactggctgatctgaccctatacagattaaaggatgcg
tttgatgccatgggctactaccatttagctttggcagcagccctggaggacaaagaaagc
ctaagcacactgtacataatctacatgaagctcgcagagatccatgccaaccacatgcct
gatgctgaactgtgtaagaactacatggacagagcgcaaagtctaaggagggaactggca
ggatacacagactctagtgacacagaagaaacacatcaagacctggccgaggcagcatct
gacattcagaccaaagctggtcagtcagattccagcagtggcactagtactctcacagag
tccagcatgactgacaccagcctcacaatcgatgcccagaaagagtctgagctcattctc
tctaacttaagtcacaaagaagacacggacactaacatatcagaggaaacagacacaggg
cctgctgataatatcagtccggagactagctgtcccgacaatacaaaccacattcatgaa
agcagaatgaaggagggcttgactattctattgtaa
DBGET
integrated database retrieval system
