Ctenopharyngodon idella (grass carp): 127494358
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Entry
127494358 CDS
T08802
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00061
Fatty acid biosynthesis
cide00071
Fatty acid degradation
cide01100
Metabolic pathways
cide01212
Fatty acid metabolism
cide03320
PPAR signaling pathway
cide04146
Peroxisome
cide04216
Ferroptosis
cide04920
Adipocytokine signaling pathway
Module
cide_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127494358
00071 Fatty acid degradation
127494358
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127494358
09143 Cell growth and death
04216 Ferroptosis
127494358
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127494358
03320 PPAR signaling pathway
127494358
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cide01004
]
127494358
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127494358
Enzymes [BR:
cide01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127494358
Lipid biosynthesis proteins [BR:
cide01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127494358
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of breast milk
127494358
Exosomal proteins of breast cancer cells
127494358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127494358
NCBI-ProteinID:
XP_051716136
LinkDB
All DBs
Position
14:complement(22827885..22853660)
Genome browser
AA seq
697 aa
AA seq
DB search
MQAHELLKQLRIPELSEVRDYFRSLSTNTLLGMGAFTAATAYWYATRPKALKPPCDLRMQ
SVELPGGEFARRAAILNGGPLLTHVYEDAKTMYECFHRGLRESKNGPCLGSRKPKQPYDW
LSYSEVIERAENLGSAFLHKGHSKNGDPYVGIFSQNRPEWTISELACYTYSLVSVPLYDT
LGTEAIGYILDKTCISTVVCDVAEKARLLMDCVSGTQHSLKTLILVEDFDADLVSRGQRC
GIDIISLKDAENIGKAHRQRPAPPQPDDLAIICFTSGTTGNPKGAMLTHKNIVSNLSAFI
QVTQSSCPMSPLDSHISYLPLAHMFERVVQGAILLHGGRIGFFQGDIRILMDDLTTLKPT
IFPVVPRLLNRMFDKIYGQANSPLKRRILEFAFKRKEAEMMSGIMRRDSIWDKIIFKKVQ
ASVGGCVRMMVTGAAPISAPVLTFLRAALGCQFYEGYGQTECTAGSTTTIPGDWIAGHVG
APLPCNDLKLVDVAEMNYFAANGEGEVCVRGPNVFKGYLKDPEKTKEALDEGGWVHTGDI
GRWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYIRSEAVSQAFVHGDSLQACLVAII
VPDPDYLPGWAKKRGIEGSYEELCKNKEVKKAILEDIVKLGKESGLKSFEQVKDIALHTE
MFSIQNGLLTPTLKAKRADLRNYFRKQIDELYSTIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacacgagctgttaaagcagctgagaatccctgagctgtccgaggtcagggat
tatttccgcagcctctccaccaacacactcctcggcatgggcgcattcaccgccgccacg
gcgtactggtacgccacgagacccaaagccctcaaaccgccctgtgacctgcgcatgcag
tcggtagagctcccgggtggagagtttgctcgtcgagcggccattttaaacggaggccca
ctcttgacccatgtctacgaagatgccaagaccatgtacgagtgctttcacaggggcctg
agggagtcgaaaaacggtccctgtctgggatccagaaaaccaaagcagccgtatgattgg
ctttcatactcagaggtgattgagcgagcggagaatttgggatcagcatttctacacaaa
ggacactcaaaaaacggagacccctatgtcggcatcttctctcagaacaggccagagtgg
acgatttcagagctggcctgctacacatactctctggtatcagttcctctgtacgacacc
ttgggcacagaagcgataggctacatcctcgacaaaacctgtatctctacagtcgtatgt
gacgtagccgagaaggccaggctgctgatggactgtgtttccggcacacagcactcgctc
aaaaccctgatcctcgtggaagacttcgacgctgatttggtgagccgaggacaacggtgc
ggcatcgacatcatcagtctgaaagacgcagagaatatcggcaaggctcatcgacagcgt
cctgcgccgcctcagcctgatgatttggctattatttgttttacaagtggaaccacagga
aaccctaaaggtgcgatgctcacccacaagaacatagtgtcaaacctttctgccttcatc
caagtcacacagtcctcttgccctatgagccctctggactcgcacatctcctacctgccc
ctggcgcacatgtttgagagagtcgtacagggtgcgattctgttgcacggcggacggatc
ggatttttccagggtgacattcgtattttgatggatgacctcacgaccttgaagcccacc
atattccctgtggttcctcgtctgctgaaccgcatgtttgacaagatctacggacaggcc
aacagtcccctgaagagacgcatactggagtttgccttcaagaggaaagaggccgagatg
atgagcggaatcatgaggagagacagtatatgggacaagatcatcttcaagaaagtccag
gccagtgtcggcggttgcgtgcgaatgatggtgactggagccgcacctatttcagcacct
gttctcaccttcctgcgcgctgcgttgggctgccagttttatgaaggatacggacagact
gaatgcaccgccggcagcacaactacaataccaggagactggattgcaggtcatgttgga
gctcctctgccctgtaatgacttgaaactggtggatgtggcagagatgaactattttgct
gctaacggcgagggagaggtgtgtgtgaggggtcctaatgtttttaagggatatttgaaa
gatccggagaagacaaaggaagctcttgatgaaggaggttgggttcacacaggagacatc
ggccggtggcttccgaatggcactctgaagatcgtggaccgtaagaagcacattttcaag
ctggctcagggagaatacatcgctccagagaagatcgagaacatctacatcaggagtgaa
gctgtgtcgcaggccttcgtacatggagacagtctgcaggcctgtctggtggccatcatt
gtgcctgatccagactatctgcccggctgggccaagaagagaggcatagagggctcatat
gaagaactgtgcaaaaataaggaggtaaagaaagctatactggaggacattgtgaaattg
ggtaaagaaagtggcttgaagtcttttgaacaggtgaaagacattgctctacacactgag
atgttttccatccaaaatggcctcctgacgcccacccttaaagccaaacgtgccgatctc
aggaactacttcaggaaacagatcgatgagctttactccaccatcaaaatgtaa
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