Ctenopharyngodon idella (grass carp): 127494481
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Entry
127494481 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127494481
03036 Chromosome and associated proteins [BR:
cide03036
]
127494481
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
127494481
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
127494481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127494481
NCBI-ProteinID:
XP_051716364
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All DBs
Position
14:complement(28439543..28462220)
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AA seq
702 aa
AA seq
DB search
MGDTLEFNDIHQEVKGSWNDGRLRFSKQSVVYKSHKTGKVDSXPAPELSAAQWRRVCLGH
GIKLATSTGHIYKYDGFKETDFEKISAFFKANYKVELAEKDLCVKGWNWGTAKFTGSLLS
FEVSDSPVFEIPLSSVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLALNMSEDEVEKRFE
GKLSKNMSGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQNNQYTFSNIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGADGYSDSDEDQHDAYLERMKQEGKIREEGDGSDESEGDSDESF
NPGEEDDDVPEEYDSNASASDSEGDDGDSEDEGKKKKVEKKPKKVVKEKKERKPRKEKKV
KDAGAPKRPMSAYMLWLNGNRERIKSENPGISVTEISKKAGEMWKQLGKDRKEEWDRKAE
EAKRQYEKAMKEYRESGGGAASVTKEKKKTGGKVEAKKKSGGEKEKKKEGGNESFKSKEF
ISSEESSSESDHDRGSKRKASDDEEEEAASTPATSEEESGSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaatgacatccatcaagaggtgaagggatcttggaatgat
ggccgtctgaggttcagcaagcagtctgtggtgtataaaagccataaaacagggaaggtg
gacagtnatccggctcctgaactctctgcggcccagtggcgtcgggtctgcctgggtcat
ggaatcaaactggccaccagcactggacacatctacaaatacgatggcttcaaagaaaca
gattttgaaaaaatctcagcgttttttaaagcgaactacaaggtcgagttggcggagaag
gacctgtgtgtgaagggctggaattggggcaccgccaaatttacagggtctctgctgtca
tttgaggtgagcgacagtcctgtctttgagatcccactgtccagcgtatcccagtgtgca
acgggaaagaacgaggtaacggtggagttccatcagaatgatgatgcagaggtgtcactc
atggaggtccgcttctatgtcccgcccaacactggagacgacggctcagaccctgtggag
gcgttcgctcagaatgttctctcaaaggcagacgtcatccaagctactggagatgctgtg
tgtatctttaaagaacttcagtgccttacgccgagaggaaggtatgatattcgtatctac
ccctccttcctgcacctgcatggtaagacttttgattacaagatcccctacaccactgta
ctgcgtctcttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtctc
gaccctcccattaaacagggtcagacacgttatcatttcctcatcctcctcttctccaaa
gatgaagacatcagtcttgctctcaacatgagcgaggatgaggtggagaagcgtttcgaa
gggaagctcagtaagaacatgtctggtccgctctatgagattgtcagcagggtcatgaag
gctctggtcaacaggaagatcacggtgcctggaaacttccagggtcactccgggtctcag
tgtataacgtgtgcgtataaagcaagctcagggctgctgtatcccctggagagaggcttt
atctatgtgcacaagccaccggttcacctgcgcttcgaggagatctcctgcgttaacttc
gccagaggaaccaccaccactcgctcctttgacttcgaaatagagaccaagcagaataac
caatacaccttcagcaacattgagagggaagaatatggaaaactctttgactttgtcaat
gccaagaagctgaacatcaagaacagaggatttaaagagggcatgaaaggagcagatggt
tacagtgactctgatgaagaccagcatgacgcttacctggagaggatgaaacaagagggc
aagatcagagaggagggagacggcagtgatgaatctgagggcgatagcgatgagtctttc
aaccctggagaagaggatgacgacgttccagaagagtatgacagtaacgcttcagcgagt
gatagtgagggagatgatggtgacagtgaagatgaaggaaagaagaaaaaagttgaaaag
aagcccaagaaagtggtgaaagagaagaaagagagaaaaccacggaaagagaaaaaggtg
aaagacgcaggtgctcctaagaggccgatgagcgcttacatgctgtggctgaatggcaac
agagagcgcatcaagagtgagaatcctgggatatcagttactgaaatctccaagaaggct
ggggaaatgtggaagcagctaggcaaagaccggaaagaggagtgggaccgaaaagcagaa
gaggccaagagacaatacgaaaaagccatgaaggagtacagagagagtggagggggagcg
gcatctgttactaaggaaaagaaaaagacaggaggaaaggtggaagctaagaaaaagagt
ggaggagaaaaggagaaaaagaaagagggcggaaacgaaagttttaagagcaaagagttc
atctccagcgaggagagctcatctgaatctgaccacgacagaggcagcaaacgcaaggct
tctgatgatgaggaagaggaagccgcctccacaccagccacctcagaggaggagtcagga
tctgactga
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