Ctenopharyngodon idella (grass carp): 127494511
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Entry
127494511 CDS
T08802
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
cide04510
Focal adhesion
cide04540
Gap junction
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127494511
04020 Calcium signaling pathway
127494511
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127494511
04540 Gap junction
127494511
09142 Cell motility
04810 Regulation of actin cytoskeleton
127494511
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cide04052
]
127494511
Cytokines and neuropeptides [BR:
cide04052
]
Cytokines
Growth factors (RTK binding)
127494511
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Neur
NDUS4
Motif
Other DBs
NCBI-GeneID:
127494511
NCBI-ProteinID:
XP_051716409
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Position
14:7494915..7552373
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AA seq
343 aa
AA seq
DB search
MIPLLLLILISSLHQHESVAESSHISKSHLASTKEQNGVHESQHEKLISVTGDGIIQSPD
FPNTYPRNTVIAWRLVAVTESSRIQLTFDPRFGLEDAEDGICKYDYVEVKEPVGGIVLGR
WCGSQMVPGPQVSKGNQLLIRFVSDEYFPSDPGFCIHYTLLHQRQSEPEAPAVMPAWMQS
VDVLSEAVAGFSTMEEVMKYLEPERWQVDMEDLYKPTWQVVGKSFFHQKKSRGVVDLNLL
REEVQLYSCTPRNFSVSVREELKRTDAIFWPSCLLVKRCGGNCACCSLNCYDCQCSPTKV
AKKYHEVLMLKHRAGGRGLQKTLTDVPLEHHEECSCVCKNDSD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattccattgcttctcttgattcttatatcgtctcttcatcagcatgagtcggtggcg
gaatcgagtcacatcagtaagagtcacctcgccagcactaaagagcaaaatggagtgcat
gagtctcaacacgagaagctcatcagtgtcactggggatggaattattcaaagtcctgac
ttccccaacacatatccccggaatacagttatagcgtggcggctggtggcagtcacagaa
agttccaggatccagctgacctttgatccgcgctttggcctggaggacgccgaggacggc
atttgcaagtatgattacgtggaggtgaaggaacctgttggagggatagtgttgggtcgt
tggtgtggctcacagatggttccagggccccaggtatccaaggggaaccagctcctgatc
cgcttcgtctctgatgaatactttccctcagaccctggattctgcatccattacactttg
cttcatcagaggcagtcggagcccgaggcccctgcagtgatgcctgcgtggatgcagagt
gtggatgttctgagtgaagctgtagctggtttcagcacaatggaggaagtgatgaaatac
ctggagccggaacgctggcaggtagacatggaggacctctacaagcctacctggcaggtg
gtgggcaaatcgttcttccatcaaaagaaatccagaggagtggtggacctgaacctgctt
cgtgaggaggtgcagctttacagttgcactccacggaacttttctgtctcagtgcgtgag
gaactgaaaaggacggacgccatcttctggcccagctgcctgctggtgaagcgctgtgga
gggaactgcgcatgctgctctctcaactgctatgattgccagtgctcgcctaccaaggtg
gccaaaaaatatcatgaggttctgatgctgaagcacagggcagggggtcggggactgcaa
aagactctaacggatgtccccctggagcaccatgaggagtgtagctgtgtctgtaaaaat
gactcagactaa
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