Ctenopharyngodon idella (grass carp): 127494524
Help
Entry
127494524 CDS
T08802
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127494524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127494524
Enzymes [BR:
cide01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
127494524
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127494524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Zn_ribbon_RanBP
Fapy_DNA_glyco
DUF7505
Motif
Other DBs
NCBI-GeneID:
127494524
NCBI-ProteinID:
XP_051716439
LinkDB
All DBs
Position
14:complement(7031080..7037397)
Genome browser
AA seq
568 aa
AA seq
DB search
MVEGPGCTLNGEKIRARVQKGQKVLDIRENESSKSSVDSTRSSFQSFMGCQFTGVETLGK
ELFMYFGFRALRLHFGMNGSMRINPLEKDLKGKPPVLVIQLTNDAVCFFDTTVEIRLSDD
CEQKVKAMEALDICSPKFSFSRAVEAVKRESERMLCDVLLDQAVLPGVGNIIKNEALFDS
GLNPAVKVKQLTSEQVHHLVKMTRDFTLLFYKCRKNGSPLYKHYKVYKRPNCGQCSGTVT
VCRLGDNGRMTYYCQRCQTGDPREVNISKLPTRNSLIGWAYQGGMSNNDDVAKREEEEWA
CSLCTLINRPINKYCDACMSPRPEEPTKLEHSPLSKDLIRYPCNSFSKPLQEIKMNRRTA
FGTTTLVLTNLSAKPDSPSSPAINQAHTPETMRGLSTHNNLQQRGTGNGVSGMQFKGNEP
YKRESLAEHSQPNKRMKTTNGVLSGGSMQRICSSRHTQSNDASLPTTPCCNSHHRPCTVR
VVTKEGENKGRQFYTCSLPRGTQCNFFEWADLHFPMCHHGKRTLMKTVLKLGPNNGRNFY
TCPVKMGKQCNFFQWAENGPGVSILPGC
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagggtccggggtgcactttaaatggagagaagattcgtgcaagagttcaaaag
ggacagaaagttttagacatacgagaaaatgaaagcagtaaatcatctgttgacagtacc
aggagctctttccaaagctttatgggctgtcagttcacaggggtggagacactggggaaa
gagctgttcatgtattttggcttcagagctctgagactgcacttcggcatgaatggttct
atgaggataaaccccctggagaaagacctgaaaggaaaacccccagtgctggttattcaa
cttaccaatgatgctgtctgtttctttgacacaactgtagaaatcagactctcagatgac
tgtgagcagaaagtaaaagccatggaggctcttgatatctgttcaccaaagtttagtttc
tctcgggcggtggaagctgtaaagagggagagtgagagaatgctctgtgatgtactgttg
gatcaggccgtcctacctggtgtaggaaacataatcaaaaacgaagcgctcttcgacagt
ggccttaaccctgctgtcaaggtcaagcagttgacaagtgaacaagttcatcatcttgtg
aagatgacaagagatttcacactcctattttataagtgtagaaagaatggatccccactt
tacaagcattataaggtgtataaacgtccaaactgtggccagtgcagcggaactgtcacc
gtctgtcgactgggagacaacggtaggatgacatactactgtcagcgctgtcaaacaggt
gatccaagggaagtgaacatcagtaaactcccaactcgcaatagtctgattggatgggct
tatcagggaggaatgagcaacaatgatgatgtggcgaaacgagaggaggaagagtgggca
tgttcactttgcactctaatcaacaggccaatcaacaagtattgtgatgcttgtatgagc
cctagaccagaggagcccacaaagctggaacattcacctttgagtaaagacctgatccgc
tacccctgcaacagttttagcaaacccctgcaggaaataaagatgaatcgtaggactgca
tttgggaccaccactctagtcctaaccaatctcagtgcaaaacctgactctccttcaagt
cccgccattaaccaggcacacacaccagagacaatgaggggtctgagcacgcacaacaac
ttgcagcagaggggtaccggtaatggtgtgagtgggatgcaattcaaaggcaatgagccc
tataagagagaatctctagcagaacacagtcagcctaacaagagaatgaaaaccacgaat
ggagtgctttctggaggaagcatgcagcgcatctgctcctcaaggcacacacagagtaat
gacgcatccctacccacaaccccctgctgcaatagtcatcaccgaccatgcaccgtgaga
gtggtcactaaggaaggagaaaacaaaggcaggcagttctacacctgctccttacccaga
ggaactcaatgtaacttctttgagtgggcagacctgcattttcccatgtgtcatcatggc
aaacgaactcttatgaagaccgttctaaaactgggaccgaataacggccgcaacttctac
acatgcccagttaaaatgggcaagcaatgtaacttcttccagtgggctgagaacggccct
ggtgtctcaattctgcctggctgctga
DBGET
integrated database retrieval system
