Ctenopharyngodon idella (grass carp): 127494548
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Entry
127494548 CDS
T08802
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127494548
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Protocadherins
127494548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
TMEM154
Motif
Other DBs
NCBI-GeneID:
127494548
NCBI-ProteinID:
XP_051716492
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All DBs
Position
14:complement(13863981..13877407)
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AA seq
1026 aa
AA seq
DB search
MFVFLLLLCLADGVVSQIRYSVPEEAEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDRERICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAMHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGTLVIQLNATDSDEGPNGEVIYSFSNHISSRVKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIIFSTVTESVSENAATGTVIALLS
VTDKDSEDNGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRETVEAYTVTVVARDKGIP
SLATSKSIKVHVSDENDNAPTFTQPIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
IVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFVVQARDSGSPELWSNATVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSVKRDPQQLYELLIEVRDHGQPPMSCSAVVQVTLVDSLVE
GHSGERGTAKAKDASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYSTCLASD
CCCLVGCGSCGSGGCCGRQARAARKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFLKACSPSRSNDTEHNPCGAIVTGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFMPTEARQGADYRSNLHVPGMDSVPDSEVFE
GETLAGDQSFSTFGKETPHHPNQMHQHQHHQHHLNASTLERKEFDALLCNSRMPYKAACL
SRKRIC
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtttttgctcctgctgtgtctcgcggatggggtagtttcgcagatacgttac
tctgtgcccgaggaagcggagcatggcacgtttgtggggaatatagcagaggatttggga
ctggaccttacaaaactttcatcccgccgctttcaggtggtgcctagctcgcggacgccg
tacctggaagtaaacttggaaaacggggtgcttttcgtgaacgagaaaatcgaccgggag
cgcatctgtaagcagagcgccagctgtttgcttcacctggaagtgttcctggagaaccca
ctcgagctctttcgcgtggagatagaggtggtggacatcaacgacaacccaccgagcttt
ccggagacggacatcaccgtggaaatatccgagagcgcaaccccgggtacgcgcttccct
ttggagagcgcttttgatccggatgtcggtagtaacgcattgcgcacttacgacatcacg
aacaacaactatttctacttagacgtgcaaacacagactgatggcaacaaattcgccgag
ctggttttggaaaagccacttgatcgggaacaacaggcgatgcaccgttacgtcctcacg
gccgtggacggtggccagcctcctcggacaggtacagcactgcttgtggtcagggtgctc
gactccaacgataacgtccccgtgtttgatcagccggtgtactcggtcaacctggccgag
aacgcgcccgtgggcacgctcgtcatccagctgaacgcgaccgactcagacgagggcccg
aacggagaggtgatttactcgttcagcaaccacatctcaagcagggtcaaggaactgttc
gatatcgatgcccgaacgggccgtatagaggtcagaggtgaggtggactttgaggagagc
agtctgtatcagatttacgttcaagcgaaagacatgggacctaatgctgtgcccgcgcac
tgtaaagttttggtcaaagtgacggacgtgaacgacaacgctccagagatcatcttcagc
accgtcacggagtcagtgagcgagaacgcagccacgggcacagtcatcgctctgctcagc
gtcaccgataaagactctgaagacaacggccagactcatgtggagattctcggagatgtt
ccttttaagctcaaaacctctttcagaaattattacaccatcgtgaccgacggtcctctc
aaccgagagactgtagaggcgtacacggtcaccgtggttgcgagagataaagggattcca
tctctggcgaccagcaaatcaatcaaagtgcacgtgtctgacgagaacgacaacgcgccc
acgtttacgcagcccatttatgatgtgtatgtgactgaaaacaacgtccccggtgcttac
atctacgctgtcagtgcagtcgaccctgatgtcggacagaatgcttatataacttactcc
atagtggagtgtgaaatccagggtatgtctgtggtcacgtatgtgtccatcaactcggag
aacgggtatttgtacgccctcagatcctttgattatgagcaactaaaagacttcagcttc
gtggttcaagcgagagactcaggcagccccgagctgtggtccaacgccacggtgaatgtc
attatagtagatcagaacgataacgcgccgtctgtgattgcgcctcttggaaaaaatggc
actgcgcgggaacctttgccgcgctctgccgagccaggctacctagttacgcgcattgtc
gccatggatgcagatgatggagagaacgcgcgcttgtcctacagtatacagagaggtaac
gagaatgggatgttcagaatggactggcgcaccggggagttgcgcacggcccgccgggtg
tcagtcaaacgagacccgcaacagctgtatgagctgctgattgaggtaagggatcacggg
cagcctcccatgtcatgcagcgcggtggtgcaggtgacacttgtggacagtctcgtggaa
ggccacagtggagaacgcggtactgccaaggccaaagacgcgtctctggacttgacgctc
atcctcatcatcgcgctcggctccgtttccttcatcttccttctggctatgatcgtgctg
gccgtgcgctgtcagaaggagaaaaagctgaacatctacagcacctgcctggcgagcgac
tgctgttgcctcgtgggctgcgggtcgtgcgggtcaggcggctgctgcggtcgtcaggcc
cgggctgcccggaaaaagaagaaactgagcaagtcagatatcatgctggttcagagcact
aacacagccaacgtgagcgtggcgagcgccgcgcaggtgcccgtggaggagtcagggagc
ttcggttcgctacatcaaagtcagaactactgctatcaggtctgtctgactccggaatcg
gccaaaacggatctcatgttcctgaaggcctgcagcccgtcgcgcagcaacgacaccgag
cacaacccgtgcggagccatagtgaccggctatacagaccaacagcagccggacatcata
tccaacggcagcctgctctccagtgagacaaaacaccagagagcagagctcagttatttg
gtggaccgaccaaggcgtgttaacagctctgcattccaggaagcagatatcgtgagctca
aaagacagcggtcatggagacagtgagcagggagacagtgaccatgacgccatgcatcgc
ggacattcctctggagcagacctgttctccaactgcacagaggagtgcaaagccctcggc
cactcagatcgctgctggatgccaagtttcatgcccaccgaggcgcgacagggtgccgat
taccgcagcaacctgcacgtgccgggcatggactctgtgcccgactctgaggtatttgag
ggcgagacattggcgggcgatcagtcattctcaacctttggcaaagagacgccacaccac
cccaaccagatgcaccaacatcaacaccatcaacaccacctcaatgcttccacgctagag
aggaaagagttcgatgcacttctgtgtaactcgcgcatgccttacaaagccgcctgtctg
tcgcggaaaaggatatgctag
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