Ctenopharyngodon idella (grass carp): 127494572
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Entry
127494572 CDS
T08802
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127494572
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127494572
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127494572
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127494572
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Protocadherins
127494572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
127494572
NCBI-ProteinID:
XP_051716528
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Position
14:complement(28615097..28620619)
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AA seq
831 aa
AA seq
DB search
MMNWTILQWVLLLASAGQIQSHALHFTILEEQEAGIKIGSLSRNYSAPYQLFDEYIRVDE
STGDLFTKKRIDRETLCPSHQERDCTFSNTAVVSHSELVLITIVVDDINDNAPIFERNEI
HIRIPEDASNGTGFPLDDQAHDMDFANNGLIHYHLEGSDGFFGIRRDGYELELVVQRKLD
RETQENHFLVLVAVDGGSVPLSATAILNVTVTDVNDNCPEFDADSPITAIVPGLGIKGAA
VAQLKATDKDLGQNAQITFSFNRQISDRAKTLFHMDGHTGLISLAVDVQVDSPEEHVLKV
LANSPLCPPAQTQVTIYIQPMASPEPTIKIRFVAENKNQVIVLQENEPPTVLALLELEDT
SSDKGTLSLEADSMPFSLKPKAGSYLLLTSKPLDFEMCSEYDVTVVISDPHGTRLHGRKV
IKVVVEDVNDNAPKFDQTHYEKDIKENNIPGVFLLKVQATDADSHQFGKVRYRLTNEGPF
RIHEETGVISVAEPLDREQQDRYQLTVLARDGGDPSQEGSAIVSINVLDLNDNPPAFSTP
HFYFFVSESLPRLSQVGKVTVSDTDEGDNGRIVDVRILNEKVPFAIDLAQGSLRSTGEVD
REKQDRYELLVVATDGGRPALSTTVKMTVFVEDVNDNQPKVLLPSSNLSCQTISPATRAG
SMITKIYAIDEDSGMNSDITYQIVASEPALQSPFQIDQHSGNITLVQHLRSEDYGMHHLF
VVIRDGGKPDPLQTTVWVNLLVNETREKCHVSAVPEYLPATLPPPMPLKDCRGESNAWLV
FFLSGLALMLISGCVLLAVVVMFMKHKRTKRKVKKKNAWETGNLCELKPLN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactggactatactacagtgggtgcttctcttggcatctgcagggcaaatccaa
agccacgcacttcatttcaccatcctggaggagcaagaagcaggcattaagatcggaagt
ctaagcaggaactactcagctccataccagctcttcgatgaatacatcagagtggatgaa
agcacaggggatctgttcactaaaaagcgcatagacagagagaccttgtgtccatcacat
caggaaagagactgtactttttcaaacactgcagtcgtgagtcattctgaattagtgctg
ataacaattgttgtggatgatattaatgacaacgctcctatttttgagaggaatgagatt
catatacgcatacctgaagatgcatcaaatgggacaggttttccactggatgaccaagcc
catgacatggactttgccaataatggcttgatacattaccatttagaaggctccgatggc
ttttttggcatcagacgagatgggtatgaacttgagctggtggtacaaaggaaactggac
cgggaaactcaggaaaaccacttcttggttcttgtagcagtggatggaggttcagtgcca
cttagcgctacagctattctcaatgtaactgtgaccgatgttaatgacaattgcccagag
tttgacgccgatagccctatcacagccattgtgccaggattaggaatcaagggcgctgcg
gtggcacagcttaaagccacagacaaagacctgggccaaaatgcccagatcacattctcc
ttcaaccgtcagatctcagacagggccaaaacgctctttcacatggatggacacacaggc
ctgatcagcttagctgttgacgtgcaggttgacagtcctgaggagcacgtgttgaaagtt
ttagcgaatagcccactttgcccccctgctcaaactcaggtaaccatatacattcagccg
atggcgagtccagagccgaccataaagatcaggtttgtcgcagagaataaaaaccaagtg
atcgtgttacaagagaacgagccccccactgtcttggccctcttggagttagaagacacc
tctagtgataaaggtactctgtccttagaagcagacagcatgccattttctttgaaaccg
aaagcaggcagctacttgcttttaacatcaaaacctctagattttgagatgtgcagcgag
tatgatgttacagttgttatttctgatcctcacggcacacgcctgcacggaaggaaagtg
atcaaagtggtggttgaagatgtgaatgataatgccccaaagtttgatcaaacacactat
gaaaaggacatcaaggagaacaatattcctggtgtgtttctgctgaaagtccaggctacc
gacgcagacagccatcagtttggcaaagtaaggtacaggcttacaaatgagggacctttc
agaattcacgaagagacgggcgtgatttcggtagcagagccgttggatagagaacagcag
gacagataccaactgactgttctggcccgggacggcggcgatccttctcaggagggctct
gctattgtgtccataaacgtactggatctgaatgacaatcctccagccttttcaacccca
catttctatttctttgtgtctgagagccttccacgactttcccaagttgggaaagtcaca
gtaagcgatactgatgaaggggacaatggaagaatagtggatgtgcgtattttaaatgaa
aaggtcccttttgccatagacctggcgcaaggatcgctccgcagcactggtgaagtcgat
cgtgagaagcaggaccgctatgagcttctggttgtagccacagatggcggcagaccggct
ctttccactacagtgaaaatgaccgtttttgttgaggatgtcaacgataatcaacccaag
gtccttcttcctagcagcaacctctcctgtcagaccatatctccagccacccgagcaggg
agcatgataacaaagatctacgccattgatgaggactcaggaatgaattcggacatcact
taccaaattgttgcaagtgaaccggctctccaaagccccttccagattgatcagcactca
ggaaacatcaccctggtccagcatctacgcagcgaggactacggcatgcaccacctcttc
gtagtcattcgcgatggaggaaagccagacccgctgcagaccaccgtgtgggtcaacctg
ctggtcaacgagactcgggaaaaatgtcacgtgagcgccgtgccagaatacctgccagcg
acactgccacctccgatgccgctcaaagactgcagaggcgaatcaaatgcctggcttgtt
ttttttctcagtggcctggcccttatgctcatatcaggctgtgttcttctggcagttgta
gtgatgtttatgaagcacaaacgcacaaaaaggaaagtgaaaaaaaagaatgcatgggaa
actggaaatctctgtgaactgaagcctttaaactga
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