Ctenopharyngodon idella (grass carp): 127494609
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Entry
127494609 CDS
T08802
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04080
Neuroactive ligand-receptor interaction
cide04082
Neuroactive ligand signaling
cide04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127494609
04082 Neuroactive ligand signaling
127494609
04519 Cadherin signaling
127494609
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127494609
Ion channels [BR:
cide04040
]
Ligand-gated channels
GABA-A
127494609
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Zip
Motif
Other DBs
NCBI-GeneID:
127494609
NCBI-ProteinID:
XP_051716577
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Position
14
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AA seq
556 aa
AA seq
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MVSAKKEMVTAMYPTSISTLLYFLCVAACIKRISGQIRKDEKLYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLKYDGPVEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVNFP
MDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQAERAKRKQAAAAA
ASAKSSTPSGKAKDTEEVLQQNSDTNGNLRKRVNSSIQSQPDSKKTQRTETSSKSAAATS
KPTLTSQSSSTSEGTSSFSSQSRLSPSSASQSNAATLSSASKTTPPAPPSTPTVPEKQSP
GATPGSASLHHLLGPKLENIKKKEAKAAPQPAAPATGGASKIDEYARILFPVSFGAFNMV
YWVVYLSKDTMEAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccccacttctatttccactctc
ctctactttctctgtgtggcggcttgcataaagagaatatctggacagatcagaaaggat
gagaaattatacccggaaaatttcacgcgcattctggaccgactcctggatggatacgac
aacagactccgacctggatttgggggtccagtaacagaagtgaagactgatatttacgtc
acaagttttggcccagtttccgacgtggagatggagtacaccatggatgtgttcttccgc
cagacgtgggtggataggcggttaaaatatgatggcccagtggagatcctccggctaaat
aacctgatggtgaccaaagtctggacccctgacacgttcttccggaatggcaaaagatcc
gtggctcacaacatgacggcgcccaatagactcttccgaatcatgaagaacggcaccatc
ctgtacactatgagattgacaataagtgcagaatgtcccatgaaacttgtcaatttcccg
atggatggccattcctgccctctgaagttcggcagctatgcctatccaaagactgagatg
atctacacctggaccaaagggccacagcattctgtggaggtcccacctgagtcgtccagc
ctggtccagtacgacctcatcggacagactgtgtcaagcgagactgtaaaatccatcaca
ggtgaatatgtggtaatgacggtctacttccacttgaaacggaaaatgggctacttcatg
attcagacgtacatcccctgcatcatgactgtaatcctttcccaagtgtctttctggata
aataaggaatccgtacccgccagaactgtctttggaatcaccaccgtgctcactatgacg
accctcagcatcagcgctcgtcactctctgcccaaggtctcgtacgccacagccatggat
tggttcatcgccgtgtgttttgctttcgtcttctctgctctcatcgagtttgccgccgtg
aactactttaccaacgcgcaggcggagagagccaagagaaaacaggccgctgccgctgca
gccagtgccaagagctccacaccgtcaggcaaagcgaaagacacagaggaggttctacag
caaaactcggacaccaacggcaacctgcgaaaacgtgtcaactccagcattcagtctcaa
ccggactccaagaaaacccaaagaaccgaaacatctagcaagagcgccgcagccacatcc
aaaccaactctgaccagccaatcatcttccacctcagagggtaccagcagtttctccagc
cagtcacgtctaagccccagttctgccagccaatcaaatgcagccactttatcctccgcc
tccaagaccacaccgccagccccgccctctacaccaacagttcccgagaaacaatcgccg
ggtgcgacccctggctccgcctctcttcaccatctccttgggcctaaattagaaaatatt
aaaaagaaggaagccaaggccgcacctcaacccgccgcccctgcgaccggaggagccagc
aagatcgacgaatatgcacgtattttattcccagtgtcctttggggcattcaacatggtg
tactgggtggtttacttatccaaagacaccatggaggccaagggaggctaa
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