Ctenopharyngodon idella (grass carp): 127494621
Help
Entry
127494621 CDS
T08802
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127494621
03015 mRNA surveillance pathway
127494621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127494621
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127494621
mRNA cycle factors
P-body specific factors
127494621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
127494621
NCBI-ProteinID:
XP_051716594
LinkDB
All DBs
Position
14:8794085..8798964
Genome browser
AA seq
465 aa
AA seq
DB search
MKEDKENTRPREKKVEIKCDENEKAEKPNKEKKEAMTKIVIRRLPPSLTKEDLEEQLQPL
PELDYLEFFSSDTSLFPHLFARAYLNFKNQDDIVLFRDRFDGYVFIDNRGQEYPAIVEFA
PFQKVAKKRSKKKDAKSGTIEDDADYKKFLEFYNGDEEKFPSNPETLLEEIEAKTKELSA
KKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKEAEKLKKGE
KASDKDKDQPKDDQPKIKLLRKPEKADNGDTEKPKDKPKKQDREKQKEDRPPGGGEMKKR
QNGEHREEKGAKSEDSGHKDYRDRDGDRERDRDRDRERRQKEKERIRRQDEERRRRRERQ
DGENTYKKREEEGKKDKERVWEKRKNENTGESSVNSHTEKPSKDNKKEDSAKRDRLRNKD
RPAIQLYQPGARSRNRGGGGAGGDGQAADRRAERESKNSQEKAAE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggaaaacacgcgtcccagagaaaagaaagtggaaataaaatgtgac
gaaaacgaaaaagcagagaagccaaataaagagaagaaggaggctatgacaaagattgtg
attcgacgtctgcctccaagtctaactaaagaagacttagaggagcaactgcagcctctt
ccagagctggattacctggagtttttctctagtgatactagtcttttccctcatctgttt
gcaagagcatatctgaatttcaaaaatcaagatgacatagttctattcagagaccgtttt
gatggctacgtgtttatcgataatcgaggacaagaatatccagccattgttgagtttgcg
ccattccagaaagttgctaagaaaaggagcaagaagaaggatgccaaaagtggaacaatt
gaagatgatgctgattacaaaaagtttttggagttctacaatggcgatgaggaaaaattt
ccctccaatccagagactttacttgaggaaatagaggccaagacaaaagaactcagtgct
aaaaagacaacacctctcttggacttccttaaaaataaacagaggattcgagaagagaaa
aaagaagagaggagacggagagagctagaacgcaaacgcttacgagatgaagaacggcgt
aagtggagagaggaggacagaagaaaaagaaaagaggctgagaaattgaaaaaaggagaa
aaggcatctgataaggataaggaccaacctaaagatgaccagccaaaaatcaagctctta
agaaaaccagagaaagcagacaatggtgatactgagaagccaaaagacaagcctaagaaa
caagacagagagaaacagaaggaagatcgacctcctggaggaggagagatgaagaagcga
cagaatggtgaacacagagaggagaagggggccaaatcagaggatagtgggcataaagat
tatagagatcgtgatggagaccgagagagagaccgggacagagacagagagcgcagacag
aaagaaaaggaacgcatcagaaggcaggatgaagaacggaggaggagaagggaacgtcag
gatggagaaaacacctacaaaaagagagaggaggaagggaagaaggacaaggagcgcgtt
tgggagaaaagaaagaatgaaaacactggagagtcctcagttaattctcatactgaaaag
ccatcaaaggacaacaaaaaggaagacagtgccaaaagggaccgtctgagaaataaggat
cggcctgcaattcagctgtaccagcccggggcgaggagccgtaaccggggaggaggagga
gcaggaggagatggacaggcagcggacaggagggctgagcgggagtctaagaattctcaa
gagaaagctgccgagtga
DBGET
integrated database retrieval system
