Ctenopharyngodon idella (grass carp): 127494698
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Entry
127494698 CDS
T08802
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127494698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127494698
03036 Chromosome and associated proteins [BR:
cide03036
]
127494698
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
127494698
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127494698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
127494698
NCBI-ProteinID:
XP_051716756
LinkDB
All DBs
Position
14:29531847..29580086
Genome browser
AA seq
2058 aa
AA seq
DB search
MSTEILRSSKLNTLVTKLHEFLGNSPDDESIDSQDISNGKMATSDLNIPVEKMNEPSCSS
EMTKPSSSRSKRKPSFVTKHTAVDEPECANESGGEHCADDSMQSGLDINKLPQGTVVVKP
EPVANEAKDEFRGPEFRIRGSKVKEDSTRKRPDEQLQEIFNCTACGQQVNHFQRDSIFQH
PALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLG
RKELSEIMSEESKWHCYVCCPEPLKDFVKTCEKVLLNLESSYKKPRGDNDKTKREDRKHK
HTKREKNAVNGQDYASDGTGTLTFSCKTLKVPKELVKKTKKLIETTNGLNRTFVQFLQHK
SKGPDVSAVSYRHLKAFKSVLADLKKAHAALEDSLEKEFEEKGLKFQNGEEQRPPDSQTA
GKTVVNSHHADPTTVREDGLDCPTKDHNPLVEEENQQNSYSADVEMKESLPLSPEKAQDW
SEERSEESEAKDQEMTDNPDFEESSVPAGEVSLDKDIVSVPPSVPEELFEMVESLAVKKE
DDAGNSTDSSDGKSMSNAEVVESNKSLTKLGKKLVVKLTPVPLKITIKRDKSNERSPSED
MDGETLQKEGQDSRRSPRMKTTPLRKSPEAKSKREPRLSMTKEECSDAVEEQCDSDSDEV
PEVLQTAALKASSDESETENCGNASGKRTKKKKLASRSTEKAKPKRKLDMGSSDSDQSNK
SSTAKKRSAKKKKGRESDSSNHNSDLEKEIKNLAKIGSGIKKSKGVKKEENECSKEGKKG
PKRSFERKRRSQKEKAKTKEEFSSSDEEEEEKEEEKQADNSDEDSDQQKIKPILESVMAS
IDGFHQSSGDEVELKAESSQVVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADK
EDGDSAKKGKDGAKKQEGSEEEDETSDSGSDVDVKKGGRRHRLLRKKLTLSEGDSDDETP
VKNKKETKKRGRRKVDSDDSADSDFEQSHSGSSDASALSEAVSEDAEENKSNKRKTRSSR
KAAKDSERSYQKEKKKRRRIKVQDSSSSGKSGEEEDGDGEGDGEGDDKGTPKNRKKIRKI
IKDDNLRTETRDALKEEEERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDE
ETKEPLVQVHRNLVTKLKPHQVDGVQFVWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQ
VVTFLHTVLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQ
ERAYALQRWQEDGGVMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHI
LKNEASAVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINP
IQNGQCADSTLADVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLTPIQ
CKLYRYYLDHFTGVGSALESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFD
EDSMEEFIASETEESSMSLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRG
GNPEGRNRAEPVEEVRASSNSGPGSPSPDWYKEFVVEADSEVLEHSGKMVLLFEILRMAE
EVEDKVLVFSQSLISLDLIEDFLELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAM
TRKKWAEEFNDTSNVRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYR
FGQVKTVFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYTFEPD
QLDDPSEKKSKRATPMLPKDPVLAELLHSYKDQIVGYHEHDSLLDHKEEEALSEEDRKAA
WAEYEAEKKGLSMRFNQPSYSQMGVGSAPNSYFPFNVAALASMSNQQLEDLINQGRQKVL
EATSALKSVPREPLEDIIAQVWKENPSLPEAQVQSMALGRQAGFELEIKHREAVYRDVLS
KQQTLMMYVQKVIANRKVQEQQMALARQGMLLNQLAMQNGLAAPMNQMDLLGLYQQLGAL
QGLPSSQLGKNPGPSKGL
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagagatcttaaggtccagtaagctgaatacattggtgactaaacttcatgag
ttcttgggtaattctccggacgacgaaagcattgattctcaagacatttccaatggtaaa
atggcaaccagtgacttaaacatccctgttgagaaaatgaatgagcccagttgctcctca
gaaatgaccaaaccttcatcttcacgctcaaagagaaaaccttcatttgtgaccaagcac
actgccgttgatgaacctgaatgtgcaaatgagagtggaggtgaacactgtgcagatgac
agcatgcagagcggtctggatattaacaagttaccacaaggcacagtggtggtgaagccg
gaaccggttgctaatgaagctaaagatgaattccgaggtccggagttccgtattagagga
agcaaagtgaaagaggacagtacacgtaaacgcccagacgagcagctccaggagatattt
aattgcacagcatgtggacaacaagtaaatcattttcagagggattccatctttcaacat
cctgcactgcatgttcttatctgcaagtcatgtttcaaatattatatgagtgacgatatc
agcaaggatgatgaagggatggatgaacaatgcaggtggtgtgcagagggtggtaatctg
atttgctgtgactactgcagcaatgccttctgcaaaaaatgcattttgcgcaaccttggg
cgaaaagagctgtctgaaatcatgagtgaagaaagcaaatggcactgctatgtgtgctgc
ccagagccgctgaaggactttgttaaaacctgtgaaaaagttttgctcaatttggaatct
tcttacaaaaagcccaggggagacaatgacaagacaaagcgtgaagaccgcaaacacaag
cataccaaacgagaaaaaaatgctgtaaatggacaggattatgcatcagacggaacggga
acgttaaccttttcctgtaagacgttgaaggttccgaaagagctagtcaaaaagaccaaa
aaactaatcgagaccacaaacggtttgaatcgtacttttgtacaattcctccagcacaaa
tcaaaaggccctgacgttagtgcagtaagttatagacacttaaaggccttcaaatcagtt
ttggctgatttgaaaaaggcacatgctgctctggaggattctcttgaaaaagaatttgaa
gagaaaggcctcaagtttcagaatggagaggagcaaagaccaccagacagtcaaactgca
ggtaaaacagttgttaactcgcatcatgctgaccccactactgtcagagaagatggtttg
gattgccctaccaaggaccataatcctttggtagaagaggaaaaccaacagaacagttac
tcagctgatgttgaaatgaaggagagccttccactctcgccagaaaaagctcaggactgg
tctgaagaaaggtctgaagaaagtgaggctaaagatcaggaaatgacagataatcctgac
tttgaggaaagctctgtcccagctggtgaagtgtctcttgataaagacattgtgtctgtt
ccaccatctgtcccagaggaactctttgagatggtagagagtcttgctgtaaagaaagaa
gatgatgctggcaactcgactgattctagtgatggaaaatcgatgtccaatgctgaggtt
gtggaatccaataagagccttacaaaactgggtaaaaagcttgttgtcaaactaacacct
gttcctcttaaaattaccataaaacgagataagagcaatgaacggtctccttcagaagac
atggatggtgagacattacaaaaggagggtcaagatagcagacgctcccccaggatgaag
accacacccttacgcaagtcaccagaggcaaagagcaaacgtgagccaaggttgtcaatg
acaaaggaagagtgcagcgatgcagtcgaggagcagtgtgattctgattcagatgaagtc
cctgaggtcctgcagactgcagctttgaaggccagctctgatgagagtgaaactgaaaac
tgcgggaacgcttctggcaaacgtaccaagaagaagaagttggcttcccggtcaactgag
aaagcgaagccaaagcgcaaactcgatatgggctcctcagattcggaccagagcaacaag
tcgtcaacagcaaaaaaaagaagtgccaaaaagaagaagggcagggaatctgactcctca
aaccacaattccgatcttgagaaagagattaaaaacctggccaagattggtagtgggata
aaaaaatccaaaggcgtcaaaaaggaagagaacgaatgcagtaaagagggtaaaaaaggc
cctaaaaggtcattcgagcgaaaacgaaggtcacagaaagaaaaggcaaagaccaaggaa
gagttttcctccagtgacgaagaggaggaggagaaggaggaggaaaagcaggctgataac
tcagatgaagacagtgatcagcagaagattaaaccaatacttgagtccgttatggctagt
attgatggtttccatcagtcatcaggagatgaagttgaattaaaggctgaatcctctcag
gtggtggatgatgacgatgaccctgagaatagaattgccaagaggatgcttttggctcag
atcaaagccaactattcatctggagctgatagttcatcggatgatgaaaacgcagacaaa
gaggatggggattcggcaaagaaaggaaaagatggtgcaaagaagcaagaaggaagtgaa
gaagaggatgaaacttcagactcgggctcagatgttgacgtgaagaaaggtggacgcagg
caccgtttgttgcgtaagaagttgactctaagtgagggtgactctgatgacgagacccca
gtcaaaaacaagaaagaaaccaaaaagagaggcaggcggaaagtggacagcgacgattcg
gcagactcggactttgagcagtcgcactctggttccagtgatgcgtcagcgctcagtgag
gctgtgagtgaagatgcggaggaaaacaagagcaataaacgcaaaacacggtcgtccaga
aaagcagccaaagacagtgagagaagttaccagaaagagaagaaaaaacgacgtcgcatt
aaggttcaagactcctcatccagtggcaagagtggagaggaagaggatggagatggtgag
ggtgatggtgaaggggatgataaaggaacacccaaaaatcgcaagaagatccgcaagatc
attaaagatgacaatctgcggacagagacccgagatgctctgaaggaggaagaggagagg
aggaaacgcattgctgagagggagcggttgagggagaaactacgagagactattgtggtg
gaggagtcatcacaggtcacgtgtcccatcaccacaaaattggtgctcgatgaggacgag
gagaccaaggagccactagtgcaggttcacaggaacctggtgaccaaactcaaaccccat
caggtggatggtgtgcagtttgtgtgggactgctgctgtgagtcagtgaagaaagtagag
aagtcttctggttctggctgtattctggcccactgcatgggtctgggcaaaaccctccag
gtggtgacgtttctccacactgtgctgctgtgcgagaaactgaacttcagcacagctctg
gtggtgtgtccactcaacactgtgctcaactggctcaatgagtttgagaagtggcaagaa
ggcttgaaggacgaggagagtttagaggtgacagagctggccacagtgaagagacctcag
gagagagcatatgctttacagcgctggcaagaagatggtggcgtcatgatcataggctac
gagatgtatcgcaacctcacgcaaggacgaaacatcaagagcaagaagctgaaagaaacc
tttcagaaaactctagttgatccaggtccggattttgtcatctgtgatgagggtcacatc
ctgaagaacgaagcatctgctgtttccaaagccatgaactccatcaagactcgtcggcgg
gtggtgctgacgggaactccactgcagaacaacctgatcgagtatcactgtatggtgaac
ttcattaaggagaacctgctgggatcagtgaaagagttcagaaaccgcttcatcaaccca
attcagaatggtcagtgtgccgactccacactcgctgatgtccgtgtcatgaagaaacga
gcacacatcctctatgagatgctggcaggatgtgtccaaagaagagattacactgccctt
acaaaattcctgccaccaaaacatgagtatgtgttagcggtccggttaacacccattcag
tgcaagctttatcgatactatctggatcactttacaggtgttggttctgccttggagagt
ggaagaggtcgtgcgggaaccaaactcttccaggatttccagatgctcagcagaatctgg
acccatccgtggtgcctccagctggactatatcagtaaagaaaacaagggatacttcgac
gaggacagtatggaggagttcatagcctcagagacagaagagtcctccatgagtttgacc
tctgaagatgagaagcccaaaaggaagaagaaacgaggcaaaggaaaagagcagagctca
gacaagtctgacagtgatgacctggaagtgattaaggagtggaacaccagctctcgtggt
ggaaaccctgaggggaggaatagagcagagcctgtggaggaggttcgggcctcatccaac
tctggtcctggcagcccgtcaccggactggtacaaagagtttgtggtcgaggcagattct
gaggtactggaacattctgggaaaatggttcttctttttgagatcctccgcatggctgaa
gaagtggaagataaagtgttggtgttcagccagtctctcatttctctggacctcatcgag
gattttctggagttggcaggcagagccaaagaggaagggaaactttcgccgtacaaaggt
gagggcaagtggttcagaaacattgactactatcgcctggatggttccacgaacgccatg
accaggaagaagtgggcagaggagttcaatgacaccagtaatgttcggggtcgattgttc
ctcatctcaaccagagctggttctcttgggatcaacttggtagctgcaaatagagtcata
atttttgatgcctcatggaacccatcctacgacattcagagtattttcagagtctatcgc
tttggtcaagtgaagactgtgtttgtctacaggtttttggctcagggaaccatggaggag
aagatctatgaccggcaggtcaccaaacagtcgctgtccttcagagttgttgaccaacag
cagattgaacgtcactttacgatgaacgaactgacggagctctacacatttgagcccgac
cagctggatgatccctctgagaagaagagcaagcgggccacacccatgctccccaaggat
cctgtcctggcagaactgcttcacagttacaaagatcagatcgtcggctaccacgagcat
gactctttgctggaccacaaagaggaagaggccctgagcgaggaagatcgcaaggcagcc
tgggccgaatatgaggccgagaagaagggtctgtccatgcgtttcaaccagccgtcctat
tctcaaatgggcgtgggatcagcaccaaactcctacttccccttcaacgtggctgcgtta
gcctccatgagcaaccaacagttggaggatttgattaaccagggcaggcagaaagtgttg
gaggccactagcgctctgaagtcggtgcctagggaaccactggaggacatcatcgcacag
gtgtggaaggagaatccgagtttaccggaggcccaggttcagtccatggctcttgggagg
caggccggcttcgagctggaaatcaaacacagggaagctgtttaccgtgatgtcctcagc
aagcaacaaactctgatgatgtacgtgcagaaggtgattgccaaccggaaggtccaggag
cagcagatggccctggcgagacagggtatgctgctcaaccagttggccatgcagaacggt
ctcgcggctcctatgaatcagatggacctgcttgggttgtaccagcagcttggggcgctc
cagggcctcccctcatcacagctgggcaagaacccgggcccttctaagggactgtag
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integrated database retrieval system
