Ctenopharyngodon idella (grass carp): 127494739
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Entry
127494739 CDS
T08802
Name
(RefSeq) neuronal PAS domain-containing protein 4A
KO
K26457
neuronal PAS domain-containing protein 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127494739
Transcription factors [BR:
cide03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127494739
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
127494739
NCBI-ProteinID:
XP_051716834
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Position
14:10415889..10421877
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AA seq
930 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDADKSRLSYLHIMSLACMYTRKSVFFSQDT
GAAGSAEETTGFLSFHELNELVQVMPGFLMLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDTADHFIMRSNLVPPTSPDTDRLFRCRFNTSKSVRRQSAGNKLVLIRSHCLSP
TLDESSPGSYWTSNPVWVCFCAPLEPHTSQGGAAPEREQSSASTLESSFFLPCFRSQHSR
DMRLQEAQDSVNVYLGLNVETLRSQSWYSFLHPQDLSHASAQHCSLLREGGEGRAEMVVR
VETADHSWIWLYMVLQLETGENPIVSNNYIISETEAWSVRQQLSSEQTQLSLVLGSSTSQ
QESLSLQSPETLSSPDQVFTPGSSGLSGQSFDFSTAACSAGSTEEQGGSSSIEPTQLESG
PRSSLSSMEEESFFQHEPSEPAASPSSASSPIPVTVATVSDLDFLTQNILLPPAFQIDPP
LPALPLPLPPVPTSQAQQTKEFVCTPPYTPQLGGSNFPFGEPHFSFDPTGATSPPPLAST
ATVTTTTAPTLSPSAPSNPQGSPPPPTTTLSTLLPLTITSPTTEILFPVESCSGSLYEKL
PPTPDSPGDGDCTVMTLPEVRGPLYVDVPHGPYPPEGLLTPEASPGKQPSLPFFSSLRER
EKERTEISLLAQHISTLAEGFYLDPFLAKLVPSTISERSQSPSLNSAGLDSVPLLGEFYT
LKSWKGLDLPIFSDDESLFEESILETLLQDLTSSPPLSPTHSSSSHSSPPSSPSTPECWC
SPLHFDGVSAVSAGHFCSVQSAHCNNEAGRGAMMSPVNAGNMADGKAAGEVAMETEVAPS
PLFMGIPTSPPLQLTASPASVPVSSPVRPASPGLPCAQSLLEELAALEPMFGAGASIAPG
LGQQPELYQLQCHAPQQCFRKDGSGSDPPF
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggtccactaaaggagcgtcgaaagctcgaagggaccaaataaacgcggagatt
agaaacctgaaggacttgttgcccatctccgatgcggacaagtctcggctgtcctatctt
cacatcatgtcgctggcttgcatgtacacgagaaagtctgtcttcttcagccaagataca
ggtgcagctggcagtgctgaggaaaccacgggattcctctcatttcatgaactgaatgag
ttggtacaagttatgccaggttttctcatgctattgactggagaaggaaagttactgtac
ctgtcagacagcgtctcagagcacctcggacactcaatggtagatttggtcgctcaaggg
gacagtgtgtacgacataatagacactgcagaccactttattatgaggagtaacctggtg
cctccaacttcacctgacacagatcgtctgttccgctgcagattcaacacctccaaatca
gtgcgtaggcagagtgcaggcaataagcttgttttaatccgatcccactgcctgtcacca
actctcgatgagtcttccccaggatcctattggacttccaacccagtgtgggtatgtttc
tgtgctcctctggagcctcacacttcccaaggtggagctgccccggaaagagaacaatct
tcagcttcaacactagagagcagcttcttcctgccatgtttccgttctcagcatagccgt
gacatgagacttcaggaagcacaagacagtgtgaatgtttatttgggactaaatgtggag
actctgcggtcccaatcttggtacagcttcctgcatcctcaggatctttcacatgcctca
gctcagcactgcagcctattgagagagggaggagagggcagggctgagatggtggttcgc
gtagagactgcagatcactcatggatctggctttacatggtcttgcagctggaaactggt
gaaaaccccattgtcagtaacaattacatcatcagtgagacagaggcttggtcagtgagg
cagcagctgagctctgaacagacccagctctccttggtgctgggttcaagcacttcccaa
caagaaagcctaagcttacagagtccagaaacactctcaagccctgaccaagtgttcacg
ccaggaagcagtggcctctctgggcagtcatttgacttcagcacggccgcatgcagtgca
ggatctactgaggaacaaggtggcagctcctcaatagagcctacacaactggagagtggc
ccacgttccagtctctcctctatggaagaggagagcttcttccagcatgagcccagtgaa
cctgcggccagtccatcttctgcatcatctcccattccagtcacggttgcaacagtgtct
gacttggacttcctcactcagaatattctgctgccaccggcattccagatagatcctcct
ctacctgccttgccccttcctcttccacctgtgcctacctcccaggcccaacagaccaag
gagtttgtgtgcacacccccatacacacctcaactaggtggaagcaattttcccttcggg
gaacctcatttcagcttcgatcctaccggggccacctcaccacctcctcttgcttcaact
gcaacagtaacaacaacgacggcaccaactctatctccatcagcgccatcaaacccacaa
ggcagcccaccacctccaacgacaacactctcgacgcttttgccactcactataacatca
ccaaccacagagatcctcttccctgtggagtcttgcagtgggtcgctctatgaaaaactc
cctcctactcctgacagtccaggtgatggcgactgcacggtcatgactttaccagaagtc
cgtggtccgctgtatgttgacgtcccacacgggccttacccgccagaaggtcttctcaca
cctgaagcctcacctggaaaacagccaagtctgcccttcttctcctcactgcgtgagaga
gaaaaagagagaacggagatctcgcttttagcccagcacatcagcacactagcagagggc
ttctacttagatccattcctggccaagctggttccttccaccatttctgaacgctctcag
tctccatctctgaattctgcaggacttgattcagtgccactgttgggtgaattctacacg
ctcaagtcctggaaaggcctggacctgcccatcttctctgatgacgagtctctgtttgaa
gagagtatattagagacccttctccaggacctcacatcctcccctcccctctcaccgact
cactcttcctcctctcactctagcccaccttcctctccctccactcctgagtgctggtgc
tcccccttgcactttgacggagtctctgctgtgagtgccggtcacttctgtagcgtccaa
tcggcgcactgtaacaatgaggccgggcgaggggctatgatgtcgccagtcaacgcaggc
aacatggcagatggaaaggcggcaggcgaagttgcgatggagacagaggtagcaccatcg
cctctgttcatgggcataccaacatctccaccactgcagctgactgcctcccctgcttcg
gtgcctgtctcgtcacctgtccgccctgcgtcgcccggcctgccctgcgcccagtccctc
ctcgaggagctggccgccctggaacccatgtttggggcaggtgcctcgatcgcccctggc
ctggggcaacaacctgagttgtatcaactccaatgtcatgcgccgcaacagtgcttccgc
aaagatgggagtggaagtgatcctccgttctaa
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