Ctenopharyngodon idella (grass carp): 127494755 Help Entry 127494755         CDS       T08802                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide03040   Spliceosome cide04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cide00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     127494755   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     127494755  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cide03041]     127494755    04121 Ubiquitin system [BR:cide04121]     127494755    03400 DNA repair and recombination proteins [BR:cide03400]     127494755 Enzymes [BR:cide01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      127494755 Spliceosome [BR:cide03041]  Complex B   Other components    Prp19 complex     127494755  Complex C    Prp19-CDC5 complex     127494755 Ubiquitin system [BR:cide04121]  Ubiquitin ligases (E3)   U-box type E3    127494755 DNA repair and recombination proteins [BR:cide03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     127494755 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Prp19 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_HPS5 PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_Vps41 U-box Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_DCAF12 Cytochrom_D1 zf-Nse ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  127494755 NCBI-ProteinID:  XP_051716863 LinkDB All DBs Position 14:complement(1362372..1372624) Genome browser AA seq 505 aa AA seqDB search MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGADPINGQPLSEEQLIDIKVSHP IRPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVAPQAAPASQPAAVGAGGEAMEVSEQVGMTPEIIQKLQDK ATVLTTERKKRGKTVPEELVRAEDLSKYRQVASHAGLHSASVPGILSLDLCPTDTNKVLT GGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQSVVFSASPDSTIRVWSVTGGNCV QVIRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLW DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFSDHSGLVT GVAFGEHAQFLASTGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctttggtttgtgcgatttcaaacgaggtgccggagcatccctgtgtctctcctgtg tccaatcaagtgttcgagaggcgtctgatcgagaaatacatagcggagaatggagccgac cccatcaacggccagccgctgtctgaggagcagctcatcgatatcaaggtgtctcacccc atccgaccgaaggctccctccgccacgagcattcctgccatcctcaaatctctgcaggac gagtgggatgcggtgatgctgcacagttttactctgaggcagcagctgcagaccactcga caggagctgtctcacgctctctaccagcacgacgccgcctgcagagtcatcgctcgcctc accaaagaggtcacggctgccagagaggctttggcgacgctcaaacctcaggctggactg gtcgctccacaggccgctcctgcttcccagcctgcagctgtgggtgccggcggagaggcc atggaggtcagtgaacaggttggaatgactccggagatcatacagaagctccaagacaag gccaccgtcctgaccacagagagaaagaagagaggaaagaccgtgccagaggaactggtc agagcagaagatctcagcaagtatcgccaggtggcgtcccatgctggtcttcacagtgcc agtgtaccaggaatcctctctctggatctctgcccaacagacaccaacaaagtcctcacc ggtggtgcggataagaacgtggtggtgttcgaccgtcgggaggagcagatagttgccacc ctcaaaggacacaccaaaaaggtctcgtctgtcatctaccaccctgctcagtcggtggtg ttctcggcgtctccagacagcactatccgcgtgtggtcggttactgggggcaactgcgtg caggtgatcagggcccacgaggcgggtgttaccggcctctctctgcacgccaccggagac tatctactgagctcatctgaggaccagtattgggccttctctgatatccagactggacgt gtcctgactaaagtcactgatgagaccgctggatgtgctctgacctgtgctcagttccat cctgacggtctgatcttcggcactggcacggcggattctcagattaagatctgggatctg aaggaacggaccaatgtagccaacttccccggccattcaggtcccgtgacggccatcgcc ttctctgagaacggatactatctggccactggtgctcaggacagttcactgaagctgtgg gatttgaggaaactgaagaacttcaagacaattactttggacaacaattatgaggtgaag tctctggttttcgaccagagtggaacatatctggctgtcggtggatcagacatcagagtt tacatctgcaagcagtggtctgaagtgctcaacttctctgatcactctggtctggtgacc ggcgtggctttcggtgaacatgctcagttcctggcttccactggcatggacagaagtctc aaattctacagcctgtaa

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