Ctenopharyngodon idella (grass carp): 127494922
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Entry
127494922 CDS
T08802
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127494922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127494922
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127494922
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
127494922
NCBI-ProteinID:
XP_051717087
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Position
15:17221261..17558338
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AA seq
416 aa
AA seq
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MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAAVAAARGSGRGARGRGGYAAYPQSTGPGFPDYGFYSSPSDQRGP
PFSFADYGSLGPQAAQLLQSEHATSACNSPLQHLASPDQYKSPGTNPPRPGAFPGASSPG
PVADLYGPTSQDSGVGNYISAASPQPGSGFGHSIALFQLSPAVHLDQTEGMMWTDL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacatctggaagccctaacgattcgcaacacgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacttcaccagacagccttagagactat
tttagtaaattcggggaaatcagagaatgtatggtgatgagagatcccacgacaaaacgc
tccaggggatttggcttcgttacgtttgcggatgcggccagtgtagataaggtcctagct
caacctcaccacgaattagactcaaagacgattgatcctaaagttgcctttccaagacgc
gctcaacccaagatggtcacaagaacaaagaaaatatttgtaggcggattatcagctaac
acagtagttgaagatgtgaagcagtattttgaacagtttggcaaggtagaagatgctatg
cttatgtttgataaaactacaaatagacatagaggattcggctttgtaactttcgagaac
gaggatgtggtggaaaaggtctgcgagattcattttcacgaaatcaataataaaatggta
gaatgtaagaaggcccagccgaaagaagtgatgtttcctccagggacgcgggggagagct
agaggtctgccctacaccatggacgcctttatgctgggaatgggcatgctgagttatcca
aacattgtagcaacgtatggccgcggatacactggtttcgccccaagctacagctaccaa
ttccctggcttcccggcaacagcgtacggtcccgtagcggcggcggcggcagtggcggca
gcgcgcggctcaggtaggggggcccgtggaagaggcggctacgcagcataccctcagagc
acagggccaggcttccccgattacggtttctattcctcgccaagcgaccaacgggggccc
cccttctcctttgcggactatggctccctgggcccccaggcggctcagctgctgcaaagc
gagcatgccacatcagcctgcaactcccctctccagcacctggccagcccggatcagtat
aagagcccaggcaccaacccgccccggcctggagcctttcctggagccagcagccccggg
ccagtggctgacctgtacggccccaccagccaggactccggcgtgggcaactacattagc
gctgctagtccccagcccggctccggcttcggacacagcattgctttattccagctctct
cctgctgttcacctagatcagactgagggaatgatgtggactgatctttaa
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