Ctenopharyngodon idella (grass carp): 127494961
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Entry
127494961 CDS
T08802
Name
(RefSeq) FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127494961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cide04091
]
127494961
Lectins [BR:
cide04091
]
C-Type lectins
Lecticans
127494961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
Syndecan
Motif
Other DBs
NCBI-GeneID:
127494961
NCBI-ProteinID:
XP_051717196
LinkDB
All DBs
Position
15:15482842..15577528
Genome browser
AA seq
3112 aa
AA seq
DB search
MAWSITEQRQRRACHVHLFLFILTLIRDASTQGFESLGLTYGLRSELSEDAILVANNGIR
VPFGRSVYIDPINDLVIQVQPGDKCTITVLDNDPLSQRPGQLSPKKFPCEFGPNDVKYLH
FGSRSPSKDRVRLQLRYDTQTDTVIIPFMMEVEVIFTQLEILTKHMPVVVEKLLGMSNPI
DQKILEFTYDRNAHLCKVTSLASGSSLPRYGKLVDNGKLGKPVNCDEFVRMDILYQHTFA
HRSPNRDYIPMYLELQDKEANVLKQEFFQIVVLIKEGEENTAPKPSFVAMMMMEVDQFVM
TAITHDMLAAEDVESNPDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQADLKDLKIAY
KPPSVDSDAERIFQIEFEVVDTEGAISDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSR
PLSSSQNLQISDEDNLDNVQITVINGLRHGELTVLGSRRKFFTPADLDVGSVIYQHDGSD
TYSDNIIFRMTDGKNEVEFLFPITVVPTDDEPPIINANTGLVLFKNQMVPISPLMLSAAD
IDSEDSTIKFIIVPPYSSIGEVILRQSDAPEDPSTWKFNAEDEMYEKVVTEWFQHDITEG
KLFYRHIGPHNTKTIMDQFVFRVQDDNDPPNQSGENSFIVKVLPIDDIPPELYPGTTLQV
TVHEYQLTYFRKKFLRYTDLDSEDRDLKYTITQPPTDTDENSPGILGSIVLTESPNSEVT
EFTQAQINHHKIAYKPPDLELGITPHVVQFHYKVEDMAGNSANGVFTIFLQPVDNKPPQI
TNTGFTLQERGVHVITRAELDTTDADTDSSQILFTITQPPKHGQVKYTFTDMTKGNSFNL
DDISNGKISYIHNGDESTSDFFQLDVSDGVHVVTITVRINVKPIDDEAPTISLPEGTIGS
YIDVLENGATEITTNVIQGRDEDTDDLRLTFIVEDPPVFGEILVNGVPSNRFTQADIISG
LVVYAHSAGEIGLTTKHDFFNLTLTDMSDEWTVGGNKIKGVCVQVTILPLDSQAPEVFVG
PQFIVVEGEKSCIEISHISANDIDTPNDDLLCTIIVQPTSGYVENISPAPGSEKSRSGIA
ISAFTIKDIRENHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPIVIIPSNDEKPE
IHMREFVVMEGMNIVIDTPILNGADADVPADELTFIISKPPKHGYILNQLTSGTIPVTNF
TLDQIREASSIVYEHDDSENTEDSFEVLLTDGKFTVEKTVMIMVILVDDETPRMAINDGL
EIEIGEVKIINNKVLKATDLDTEDSILTYIIRYGPNQGFLQKRTPFGTLENITVGMNFTQ
NELDQDIIMYIHNGQEGVRDLIKFDVTDGINPLIDRYFYITVGGIDMVFPDVISKGVSLK
EGGRVTLTTDLLSTSDHNSPDEHLVFTITRAPIRGHLECTDTPGMPISSFTQLQLAGNKI
YYIHTADDEVKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVVTIHGLVVNEGENKLIT
PFELTVEDRDTVDQLLKFTITQVPVHGKLLFNNTRPVTSFTKQDLNENMIRYKHDGTESR
SDSFSFTVTDGTHTDFYVFPDTVYATRKPQMMKITIFSVDNRVPQVVTNKGGTTLRILPN
GHLGFLITSKALKAEDRDSPQGAVTFKITVGAEHGYLINLGKGNATITTFTQADIDDMHI
CYVLRDGDNATSDMFHFFIEDNGGNKLKSQHFRLNWAWISLEKEYYQVDEEAKFLEVVLR
RRGYLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQTTATWKVRILSDSLYEQSET
FQIVLSEPVMGALEFPEAATVEIVDPGDESTVFIPLATYSIEEDIGELLIPVRRSGDVSQ
ELMVVCFTQQGTAKGTVPTTVLSYSDYISRPEEHHSVLRFDKGETEKHCRVVVIDDSLYE
AEESFNVTLSMPMGGRLGQEFPTTSVTILPDADDAPVFYFGEMEYHVDESDGYVEVQVWR
TGSDLSKTGTVTVRSRKTDPVSAEAGVDYVGISKNLDFSPGVNMQTFKVTILDDLGQPVL
EGPEKFELVLRMPMNGILGEPGKATIYINDSISDLPKVQFRDPKYTGNENDGQISAIVYR
SGDLSYKSSVRCYSRQGSAQVMMDFNERPNTDISTIVFLPGEVEKPCVLILVDDTEHEED
EELRLVLGSPKSVSPFGASIGAQNETLIKIKDDADKAIIRFGATKFSVSEPSESGQISVV
RIPVQRTGDTSKVSVVRVHTKDGSASSGEDYHPISEDVEFKEGETEHIVEVEILYDGVRE
MREAFTVHLKPDENMVAEIQVTKAIIYIEETNSMADVTFPSVPVVLSLLQYDDTSRTRDT
QPAAGYPVVCVTSCNPKYPDFDRTGSICVAEHINNTLTRYRWLVSAPTGPDGVTSPMKEV
DFDTFFTSSKTITLDSVYFQAGSRVQCAARAVNSNGDEGLELTSPIVSISQEDGMCQPRV
VGTVGAEPFSARLRYTGAEDPDHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGT
RVGNHRCSNLLDYTEVRTRYGFITDATRNPDAIGGSAPYQYSTTLRGQNTLRFYRNLHLE
ACLWEFVSYYDMSELLNDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQH
FDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTEARFRG
LFVTAHSASLMTSMVMCVDHPGLTFNLSLVRSEPTYNQPMQQWTFISDFAVRDYSGTYTV
KLVPCTAPPSVEYSFRPVCHPREPITFDLDIRFQQVSDPVSAEFSLNTQMLLLSKRTLWL
SDGSMGFGQESDISFSEGDVIYGRVMVDPVQNLGDSFICNIEKVFLCTGADGYIPKYNPD
NFEYGCLADSPSLLYRFKIIDKAQPETQARTFGSISFNAFLAVDDPQALALVRQPGSDGF
SMDSTALFQVSAGREWYIHTIYTVRSRDNANRGIGKRSLDYHSVTHSHSISKRSASGVPD
LAQDIGAENNRGTNILHIALDRSTQKQPNLHEESQAEGVIPRELNHRESSDDQLFLIIGI
LVGLLFTILLVVLVILVVRSRREKNVTDPPKGSNSTEPMMTQVLDSNDSSEV
NT seq
9339 nt
NT seq
+upstream
nt +downstream
nt
atggcttggagtataacagagcagcgacaacgtagagcgtgtcatgtgcacttgtttctc
tttatattgactttgattcgcgatgcatctacacagggatttgagagtttgggattaacc
tacggtttaagatctgaactttcagaggatgctattcttgttgccaataatggaatacgg
gttcccttcggcagatctgtttatattgatccaatcaatgatctggttatccaagttcag
ccaggagacaagtgcaccataacagttctggataatgacccactgtcacagagaccggga
cagctgtccccgaaaaagtttccttgtgaatttggtcccaatgatgtaaagtacttgcat
ttcggatccaggagcccctcaaaagacagagtaagacttcaactcagatatgatactcag
actgatacagtcatcattccctttatgatggaagtggaggtgattttcactcagcttgag
attctcaccaaacacatgcctgtagttgtagagaaactgcttggaatgagtaatcctatt
gatcagaaaatcctggagtttacttatgatagaaatgctcatttgtgtaaagttacatct
ctggccagtggcagctcattacccaggtatggaaagctggttgataatggaaaattaggg
aaaccagtcaactgtgatgaatttgtcagaatggacattctctatcagcacacttttgcg
catcgttctccaaaccgagattatattcccatgtatttagagttacaagacaaagaagcg
aatgtactgaagcaagagtttttccaaattgtggtgcttataaaagagggtgaggaaaac
acagctcctaaaccgagttttgtagcaatgatgatgatggaagtcgaccagttcgtaatg
actgccataacccacgacatgcttgccgctgaggatgtggaatctaatcctgatgattta
atctttaatatcacttccccgctttcctttgaggagggctacattgtaagcacagatgac
aggaatttgcccatcacatctttttatcaagcagacctgaaagatcttaaaatagcctac
aagcctccttctgtagattcagatgcggagagaattttccaaatagaatttgaagttgta
gacactgagggggctatatcagacccttttgcttttatgatagtggttaagcccatgaac
actctagcaccggttgtgacccgtaacactggccaactgctttatgagggtcagtccagg
ccgctatccagctcacaaaacctacaaattagtgacgaggacaatttagacaatgtccaa
atcacagttattaatgggctccgccacggagagctcacagttctgggatccaggcgaaaa
tttttcaccccagccgatcttgatgtaggtagcgtcatttaccagcatgatggcagcgat
acgtacagcgataatatcattttcagaatgacagacggcaaaaatgaagttgagtttcta
tttcccattacagtggtgccaactgatgatgaacctcccataatcaatgccaacacaggt
ttagttttgtttaaaaaccaaatggtgcccatttctccattaatgcttagtgcagcagat
atagactctgaggattcaactatcaaattcatcatagtgcctccctactctagtatcggg
gaagtgatacttcgtcaatcagatgcaccagaggatccatccacatggaagttcaatgct
gaggacgagatgtatgagaaagtagtgaccgaatggttccaacatgacatcacagaaggc
aagctgttttacagacatatcggaccgcataatacaaaaaccatcatggaccagtttgtt
ttccgtgtgcaagatgacaatgacccaccgaaccaatcaggtgagaactctttcatcgtc
aaagttctccccattgacgatatccccccagagttgtaccccgggaccactctgcaagtg
accgttcacgagtaccagctcacctattttcggaagaaattcttgcgctacacagatttg
gactcggaagacagggacctgaagtacacaattacccagccacccactgacacagatgag
aacagccctggcattctgggaagcatcgttctaactgagagtccaaactcagaggtcacc
gagttcactcaggcacagataaaccatcacaagatagcctacaagcctcctgatctagag
ctcggaataactccacatgtggtgcagttccattacaaagtcgaggacatggcgggaaac
agcgccaatggagttttcactatatttttacagcctgttgacaataagcctcctcagatc
accaacacaggctttaccctgcaagaacgaggggtgcacgtcatcacacgtgctgagctg
gacaccacagatgcagacacggacagctcacagatactgtttacaatcacccagcctcca
aagcacggtcaggttaagtacacatttactgatatgactaaagggaattcattcaatttg
gacgatatatctaatggcaaaatatcttacattcataatggtgatgagtcaaccagtgat
ttcttccagcttgatgtcagtgacggagtccacgttgtcacaatcacagtcaggatcaat
gtgaagcctattgatgacgaagcaccaaccatcagtcttccagagggcactatcggttct
tacatagatgttttggagaacggagcaactgagatcaccaccaatgtcattcagggtcga
gacgaagacactgatgacctcaggttgaccttcatcgtggaggatccaccagtgtttggt
gaaatattagtgaatggtgtaccttccaataggtttactcaagcagacatcattagtgga
ttggtagtgtatgcacatagtgctggagaaatcggcttgacaacaaaacacgacttcttt
aatctgacgctcactgatatgtctgatgaatggacagttgggggaaataaaatcaaaggg
gtttgtgtgcaggtcaccattctgccgttggatagtcaggcccctgaggtctttgtgggc
ccccagttcattgtcgtggagggcgagaaaagctgtatcgaaatttcgcatataagtgct
aatgacattgacacccctaatgatgaccttctttgcacaattattgtgcagcccacctca
ggatatgtagaaaacatctcccctgcaccaggctctgagaaatccagatcagggattgca
attagtgctttcactatcaaagacattcgggaaaaccacatttattatgtgcaaagtatt
cataaaggcgtcgagccagttgaggacaggtttactttcaggtgttcagatgggataaat
ttttcagagagacacttttttccaatcgtgataatcccatccaatgacgaaaagccagag
atccatatgagagagtttgttgtgatggaaggcatgaacattgtgattgacactccaata
ttaaatggcgctgatgctgatgttccagcggatgagctcacgtttattatttcaaaaccc
ccgaaacatggatatatcctcaaccagttaacctcaggcactattcctgtcacaaacttc
actcttgatcagatacgagaggcttcaagtattgtctacgagcatgatgattcagaaaac
acagaggatagttttgaagttcttcttactgatggcaaattcacagtggagaaaaccgtc
atgattatggtcattttggttgacgatgaaacgccaaggatggcgattaatgatggcctt
gaaatagagataggagaggtgaaaataatcaacaataaagttttaaaagcgactgatctg
gatacagaagacagcattctgacctacatcatccgctatggtccaaatcaagggttttta
caaaagcgaacaccattcggaacactagaaaacataaccgttggaatgaacttcacacaa
aatgagcttgaccaagatataatcatgtacattcacaatggacaggagggagttcgtgac
cttatcaaatttgatgttactgatggcattaaccccttgattgacagatacttctatata
actgtgggtggaatagacatggtgttccctgatgtgatcagcaaaggtgtttctctgaaa
gaaggaggaagggtgactctaaccacagacctgctcagcaccagtgatcataacagccct
gatgagcatttggtgttcaccatcactcgtgcccctatacgaggacacttggagtgcact
gatacaccagggatgcccattagttcgttcactcagcttcaactagctgggaataaaata
tactacatccacactgctgatgacgaggtgaagatggacagcttcgagtttgaggtgact
gatggttacaaccctgtgttccgcacctttcgtgtgtccattacggatgtggacaacaaa
aagcctgtggtcaccattcacggactggttgttaatgaaggcgaaaataagttaatcact
ccttttgagctgacggtggaggaccgtgatacagtcgaccagcttttaaagttcacaatc
acccaggtgcctgtacatggcaagttgctgtttaataacacccgacctgtcacttccttc
accaagcaggacctaaatgaaaacatgatccgctacaagcacgatggaactgagtctcgt
tccgacagcttctcatttactgtcaccgatggaactcacacagacttttacgtgttccct
gacacagtttatgcgactcgcaaaccccagatgatgaaaatcacaattttttcggtggac
aacagagttccgcaggttgtgactaataagggtggtacaacattaagaattctccctaat
ggtcaccttgggttcctaatcactagtaaagcattaaaggcagaggacagagacagccct
caaggagcagtgacgtttaaaattactgtgggtgctgaacatggctatctcattaacttg
ggaaaaggcaatgccactatcaccacattcacccaagccgacattgatgacatgcatata
tgctacgtgcttcgagacggagacaatgccacaagcgacatgttccactttttcattgaa
gacaatgggggcaacaagctgaagagccaacatttccggctaaactgggcttggatctcc
ctggagaaagagtactaccaggtggatgaagaggctaagtttctggaggtggtcttgaga
cgcagaggttaccttggcgagacctcatttgttagtatcggcaccaaagatggtacagct
gaaaaggataaagatttccgtggaaaggcccagaaacaagtccagtttaacccaggtcag
accactgctacctggaaggtgcgaatcttgtcggacagcctgtacgagcagtccgagacc
ttccagattgtcctgtcagagcctgtcatgggagcactggagttcccagaggcagcaaca
gtggaaattgttgaccccggagacgaatccacagtgttcatccccttggctacatactcg
attgaggaagatattggagaacttctgattcctgtgcgaagatctggagatgtcagtcaa
gagctaatggtggtctgcttcacacaacaaggtacagccaagggcactgttcccactact
gtgctttcctattctgactacatttcccgacccgaggaacaccacagcgtgctgcgtttc
gataagggcgagactgagaagcactgccgtgtggtcgtcatcgatgactcgctctacgaa
gcagaggaaagctttaatgtcacccttagcatgcccatgggtggccgtctgggtcaggag
ttccccaccaccagcgtgaccatcctgcctgatgcagatgatgcaccagtcttttatttt
ggagaaatggagtaccatgtagatgagagtgacggttatgtcgaagtccaggtttggaga
acaggaagtgatctttccaaaactggaacggtcacagtacggtctcgaaagactgaccct
gtttcagcagaagctggtgtggactatgttgggattagtaagaacctggacttttccccg
ggcgtaaacatgcagacatttaaggttacaatcctggatgacctgggacagccggtgctg
gaggggccagagaagtttgagctggttctccgtatgcccatgaacggcatattgggagaa
ccaggaaaagctacgatctacatcaacgactccatctcagatttgcccaaggtgcaattc
cgagatcccaaatacacgggtaacgagaatgatggacagatatctgctattgtgtaccgg
agcggagatctgagctacaagtcaagtgtgcgatgctacagccgtcaaggctcagcccaa
gtcatgatggacttcaacgagaggccaaacacagacatctccaccattgtctttttacca
ggagaggtggagaagccttgtgtcctcatcctcgtggatgacactgaacatgaggaagat
gaggagctgagattggtgctgggaagccccaagagtgtgtctccgtttggggcctccata
ggggctcagaatgagacactcatcaagataaaggatgatgctgacaaggccatcatcaga
tttggagcaaccaaattcagtgtcagtgaacccagtgagtcagggcaaatctcagtggtg
aggatcccagtccagaggacaggagacacatccaaagtatctgtggttcgggtccacaca
aaggatggctcagcttcctctggagaagattaccatcccatctctgaagatgtggagttt
aaagagggagagacagagcacattgtagaggtggaaatcctgtatgatggtgtgcgagag
atgagagaggccttcactgtccacctcaaacctgatgagaacatggtagcggaaattcag
gtcaccaaagccatcatctacattgaagagacgaacagtatggcagacgtgacctttccc
tctgtgccagtggtgttgtctctgttgcagtacgatgatacaagcaggacaagagatact
cagccagccgcaggatatcctgtagtctgtgtcacatcgtgcaaccccaagtatcctgac
tttgaccggacgggctccatctgtgttgctgaacacatcaataacaccctgacccggtac
cgctggctggtcagtgcccccacaggacctgacggtgtgaccagccccatgaaggaggtg
gattttgacaccttcttcacctcctccaaaacaatcacattagactcagtgtatttccag
gcaggctcacgtgtgcagtgtgcagcccgggctgtcaactctaatggggatgaaggcctg
gagctcaccagccccatagtttccatcagccaagaagacggtatgtgccagcctcgggtt
gttggcacagttggagctgagcctttctctgccagactgcgctacactggagcagaagat
ccagaccatccaaacctcattaaactgactgttaccatgcctcatattgacggtatgtta
cctgtagtctccactcggccgctctccaactttgaactgaccctgagtccagacggcaca
cgtgtaggaaaccatcgctgctcgaacctgctggactacacagaggtgcggacacgctac
ggtttcatcaccgacgccacccgcaatccagatgccatcggcgggtctgcgccctaccag
tatagcacgaccctcaggggccaaaacaccctacgattctaccgaaacctgcatctggag
gcgtgcttgtgggagtttgtcagctactatgacatgtctgaactgctcaacgattgtgga
gggaccatcgggactgatggacaggtgctgaacctggtgcagtcttatgtgaccctgcgt
gtgcccctgcacgtgtcatatgtgttccattcacccgtcggtgctggtggctggcagcac
tttgacctgcagtctgagctgcgtctcacttttgtttatgatactgccatcttgtggaga
gatggcattggtagtcctccagaagctgaattacaaggggccctctatcctacaagcatg
cgtataaacgaacaaggccgtttggttgtcaacttccgtacagaagcacgttttcggggg
ctctttgtcactgcacattcagcctctcttatgacttccatggtcatgtgtgtggaccac
cctgggctgacctttaaccttagcttggtgagaagtgagccaacatacaaccagccaatg
cagcaatggaccttcatctctgactttgcagtgagggattactcaggaacttacacggtg
aaactggttccctgcacggctcctcccagtgtcgagtacagcttccgtcctgtgtgccac
cccagagagccaatcacctttgatctggacatacgcttccaacaggtgagtgatccagtt
tcagcagagttcagtcttaacacacagatgctcctgctttcaaagaggactctctggttg
tcagacggctccatgggctttggacaggagagtgatatatctttctcagagggagatgtc
atctatggccgtgtaatggtagatcctgtccagaatcttggagactcgttcatctgtaac
atcgagaaggtgttcctgtgcacaggagcggatggatacatcccaaagtacaaccctgac
aactttgagtacggctgcctagctgattcaccgtctcttttgtaccgattcaagattatt
gacaaagctcagccagagactcaggcgagaacatttggtagcattagtttcaatgctttc
ctcgctgtagacgatccccaagcgctggcgctggtgaggcagccgggctctgatggcttt
agtatggattccacagctttgtttcaggtgtcggcaggaagagagtggtacattcacacc
atctacaccgtccggtccagagacaacgcaaaccggggcattggaaaaaggagccttgac
tatcattctgtgacacatagccactcgatttccaaaaggtcagccagcggcgttccagat
ttggctcaggatattggcgcagaaaataaccgtggcacaaacatcttgcatatagcactg
gaccgcagcactcaaaaacaacccaaccttcacgaggaatcccaagcggagggtgtcatt
cccagagaactgaatcacagggaatctagtgacgaccagcttttcttgatcataggaatc
ttggtaggtcttcttttcaccatcctccttgtcgttctcgtcattctggtggtgcgatct
agacgggagaagaatgtcactgatccccccaaaggctccaacagcacagagcccatgatg
acgcaagtcctcgatagcaacgacagttcagaggtttga
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integrated database retrieval system
