Ctenopharyngodon idella (grass carp): 127494962
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Entry
127494962 CDS
T08802
Name
(RefSeq) short transient receptor potential channel 4b isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127494962
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127494962
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
127494962
NCBI-ProteinID:
XP_051717197
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Position
15:complement(15418231..15448562)
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AA seq
921 aa
AA seq
DB search
MSQLYYRRTDNSSYRDRIPLRIVRAESELSGQEKSYLNAVEKGDYASVKLSLEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKMLVQKGVSVPQPHEVRCNCIE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKTE
YEELSRQCKCFAKDLLDQTRSSRELELILNFRDNVNLLQDEANNELARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCVFIGLLFPLLSLCYLVAPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVSNNPDRQGPKPTTVEWMILPWVLGFIWTEIKQ
MWDGGFQDYMHDWWNLMDFVMNSLYLATISLKIVAYVKYSGCKPRENWEMWHPTLVAEAV
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETSDDISCKGIRCERQNNAFSTLFETLQSLFWSIFGLISLYVTNVKADHKFTEFVGATM
FGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPPPFNII
PSPKSICYLIKWIKVNVFKRRSKRTETFGTIGRRAAENVRINHQYQEVLRNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRYEVIGMMKGNQKSTCANKPGTAASDVSHQDGSLQ
YPTALKQNKKLHLYDVTEVLQQQNSEETRESLGCVVNGSPAVLADPLLKDKSRKDFPKDF
TDFGLFQKKHTIINPNKIYSLAEESKESDTDILDWVREETVEKPLAGKVEQEENESKCLM
EEEGSVLEDQEKEHIASSHEL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagctgtactaccgcagaacggataactcctcgtaccgggaccgcattccgctg
cgtatcgtgcgcgccgagtcggagctctccgggcaggagaagtcctacctcaacgccgtg
gagaagggcgattacgccagcgtgaaactatcgctggaggaggcggagatctacttcaag
atcaacatcaattgcatcgatcctctggggcgcacggctctgctcatagccattgagaat
gagaacttggagatcattgagctgctcctcagcttcaacgtgtatgtcggggacgctctg
ctccacgccatccgtaaagaggtggtgggagccgtggagctcctgctgaaccacaagaag
cccagtggagagaaacaggtaccacccatcctgctcgataaacaattctcagacttcaca
cctgacatcacccccatcatcctggctgcccacaccaacaactacgagatcatcaagatg
ttggtgcaaaaaggtgtgtcagtcccccagcctcatgaggtgcgctgtaactgcatagag
tgtgtctccagttcggatgtggacagtctgcggcactcacgctcccggctgaacatctac
aaggccctggccagcccctctctcattgccctgtcaagcgaggatcctttcctcactgcg
ttccagctcagctgggagctccaggaactcagcaaagtggaaaacgagttcaaaactgaa
tacgaggagctctcccgccagtgcaaatgctttgcgaaggatctcctggaccagacccgg
tcttcacgtgagctggagttgatccttaatttccgtgataatgtcaacctgctgcaggat
gaggccaataatgagctggctcgcctgaaattggctatcaaataccgccaaaaagagttt
gtagcacagccaaattgccagcagctgttggcctcacgctggtatgatgaatttcctggc
tggaggagacgtcactgggctggcaagttcatcacctgcgtcttcattggcctcttattc
cccctgctctccctctgttacctggtggcacccaagagccgctatggcctcttcatccgc
aagcccttcattaagtttatttgccacaccgcctcttatttgaccttcctcttcctcctg
ctgctggcttcccagcacatagtctctaacaatcctgatcgtcaaggtccaaagcccacc
acggtggagtggatgatcctaccctgggttctaggattcatatggacagagatcaagcag
atgtgggatggtggatttcaagattacatgcatgactggtggaatcttatggactttgtg
atgaattccttgtatcttgcaaccatctcactgaagatcgttgcatatgttaagtacagt
ggttgcaaacccagggaaaactgggaaatgtggcaccccacactggtggctgaggcagtg
tttgccattgccaacatcttcagctctctacgcctcatctcgcttttcacggccaactct
cacctaggtcctttgcagatatcattagggcggatgctcctggacattctaaagttccta
ttcatctactgcctggtgttgcttgcctttgctaatggactcaatcagctttacttctac
tacgagactagtgatgacattagctgcaaaggcatccgctgtgaacgtcaaaacaatgca
ttctcaacgctatttgagaccttgcagtctttgttttggtcaatttttgggttgatcagt
ctgtatgtgacaaatgtcaaagctgaccacaagttcaccgaatttgtgggtgccacaatg
tttgggacctataacatcatctccttggtggtcctcctcaatatgctcattgccatgatg
aacaattcttatcagcatatcgctgaccatgctgatattgaatggaaattcgcaagaact
aaattatggatgagttattttgaagaaggaggcaccttgccacctcccttcaacattatc
ccaagtcccaaatccatatgttacctgattaaatggattaaggtgaatgtgttcaagaga
aggtcaaagaggactgagacatttggaacaatagggagaagagctgctgaaaatgtgaga
attaaccaccaataccaggaagtcttgagaaacttagtcaaacgatatgtggctgccatg
attcgagatgccaagactgaggagggtctcacagaggagaattttaaagagctgaagcaa
gacatatctagcttccgttacgaagtcattggaatgatgaaaggcaaccagaaaagtact
tgtgcgaataagccaggcacagcggcctccgatgtttctcatcaagatggttcgcttcag
tatcccacggctcttaagcagaacaaaaaactacatttgtacgatgtcactgaagtgcta
cagcaacaaaactctgaggagacaagggagtctctcggttgtgtggtcaatggatcacca
gcagttttggcagaccctttactcaaagacaaatccaggaaggacttccctaaagatttt
acggactttgggttattccagaagaaacataccattatcaacccaaataagatatactca
ctcgctgaagagtcaaaggaatcggacactgacattttagactgggtgagagaggaaacg
gttgagaaacctctggcaggaaaggttgaacaggaagagaatgaatcaaagtgcctgatg
gaggaagagggaagtgtgttggaggaccaagagaaagagcacattgcatcttcgcatgaa
ctttag
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