Ctenopharyngodon idella (grass carp): 127495233
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Entry
127495233 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 3
KO
K11997
tripartite motif-containing protein 2/3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127495233
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127495233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
TEN_NHL
zf-RING_5
zf-C3HC4_2
Invasin_D3
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
Mala_s_1-like
YtkA
zf-ANAPC11
ATG17_like
Prok-RING_4
FTR1_4HB
Baculo_PEP_C
TRM82_WD
DUF7406
DUF8567
DUF7490
FapA
Fib_alpha
CRLF3_N
Apolipoprotein
ATP-synt_B
IcmF-related_N
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
127495233
NCBI-ProteinID:
XP_051717881
LinkDB
All DBs
Position
15
Genome browser
AA seq
774 aa
AA seq
DB search
MPLTMAKRESGSTSPVVRQIDKQFLVCSICLEHYHNPKVLPCLHTFCERCLQNYIPPQSL
TLSCPVCRQTSILPEKGVAALQNNFFITNLMEVLQREQDCTRPEASSGLESAGAATYAPP
LSCPNHEGKVMEFYCESCETAMCLECTEGEHREHVTVPLRDVLEQHKAALKNQLDAIRNR
LPQLTAALELVNEISRQLTDRKNEAVTEISNTFEELEKALHQRKTALITDLENICSTKQK
VLQAQLTSLLQGKENIQSSCSFTEQALNHGSPTEVLLVQKQMGERMGVLARHAFPEQPHE
NGHLDCQVETEGLRRSIQNLGVLLTTSAVGHTSVATGEGLRHAVVGQNTTVTVTTKDKDG
ELVKTGNAALRAQISGPDGTVTETDITDNKNGTYEIGYTLRSEGEFSFSVLLYGQPVRGS
PFRLRAIKPCDAPQSPDDVKRRVKSPGGGGGAGGHVRQKAVRRPSSMYSTTKKKENPIED
ELIYRVGTRGRERGEFSNLQGISTTSNGRIVVADSNNQCIQVFSNDGQFKLKFGVRGRSP
GQLQRPTGVAVDMNGDIIVADYDNRWLNIFSPDGKFKNKIGAGRLMGPKGVAVDKNGHII
TADNKACCVFIFQSNGKLVTKFGAKGTSERQFADKSTPNTPTEPKQSKSGPAFSPHFVAI
NNKNEIVVTDFHNHSVKVYNADGEFLFKFGSHGEGNGQFNAPTGVAVDGNGNIIVADWGN
SRIQVFDSSGSFLSYINTTADPLYGPQGLALTSDGHVAVADSGNHCFKVYRYLQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcacgatggctaagcgggaaagcggcagcaccagcccggtggtgcgtcaaata
gacaagcagttcctggtgtgcagcatctgtctggagcactaccacaatcctaaagtcctg
ccctgcctgcacaccttctgcgagagatgtctccagaactacatcccccctcagtccttg
accctgtcctgcccagtgtgcagacagacctccatcctgccagaaaagggtgttgcagca
ttgcagaacaatttcttcataactaatctgatggaagtgttgcagagggagcaggactgc
acccgtcccgaggcctcaagtgggctggagtcagccggtgccgctacatacgccccgccc
ctgtcctgccccaaccacgagggcaaggtcatggagttttactgcgagtcttgtgaaacg
gccatgtgtttggagtgcacagaaggagagcacagagaacatgtgaccgttccactgcgg
gatgttctggagcagcacaaagctgcgctgaagaaccagctggatgcaattcgcaacagg
cttcctcagctgactgcagccctagagctggtaaatgagatctccaggcagctaacagac
aggaagaatgaggcagtgacagagatcagcaatacattcgaggaactagagaaagcactg
caccagcgcaagactgccctcatcactgacctggagaacatctgcagcactaagcagaag
gtgctgcaggctcaactcacttcattactgcaagggaaggagaacatccagagcagttgt
agcttcacagagcaggcgctgaaccatggcagccccactgaggtgctcctggtgcagaag
cagatgggagagcggatgggcgttctggcccgccacgccttccctgagcagccccatgag
aacggccacctggactgtcaggtggagacagaggggctgcgtcgctccatacaaaacctg
ggagtcctgctcaccaccagcgccgtgggccacaccagcgtggctactggagagggtctc
agacatgcagttgtcgggcaaaacaccactgttacagtgaccacaaaggacaaagacggt
gagctagtaaagactggaaacgctgcactgagggctcagatcagcggtccagatggaaca
gtcaccgaaacagacataacagacaacaagaacggcacttatgagatcggctacactctc
cgctcagagggcgagttctccttctccgtcctgctctacgggcagcctgtgaggggcagc
cccttccgcctgcgagccattaaaccctgcgacgccccgcagtcgcccgatgacgtgaag
aggcgcgtgaagtctcccggaggaggtggaggggctggagggcatgtgcgccagaaggcg
gtgcgcagaccctcaagtatgtacagtacaacgaagaagaaggagaatcccatagaggat
gaactcatctatagagtggggacgcgggggcgagagcgaggggagttctccaacctgcag
ggcatctctaccaccagcaacggacgaatcgtagtagctgacagcaacaaccagtgcata
caggtgttctccaatgatggtcaatttaaattgaagttcggggtcagaggtcgctcccct
ggccagctccagcgccccactggtgttgcagtggacatgaatggcgacattattgtggcc
gactatgacaacaggtggctcaacatcttctccccagatggcaagtttaagaataaaatt
ggtgcaggtcggctgatgggacctaaaggagtggctgtggacaagaatggtcacatcatc
acagcagacaacaaggcctgctgtgtcttcattttccaatccaacggcaaactggtgacc
aaatttggtgccaaaggaacatcagagaggcagtttgcagacaaaagtactccgaataca
ccaacagagccaaagcagagtaaatctggccctgccttcagtccccattttgtggctata
aacaacaagaatgaaattgttgtgacagactttcacaatcattctgttaaggtttacaat
gctgatggagagttcctgtttaaatttggttcacatggcgaagggaacggccagttcaac
gcacccaccggtgtggctgtagatggcaatgggaatattattgtggcagactggggtaac
agtaggatacaggtgtttgacagttctggctcttttctgtcgtacatcaatacgacggcg
gatcctttgtacggtccgcagggtctggctctcacatcagatggccacgtggccgtggca
gactctggaaaccactgcttcaaagtgtaccgatacctgcagtaa
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