Ctenopharyngodon idella (grass carp): 127495248
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Entry
127495248 CDS
T08802
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127495248
Membrane trafficking [BR:
cide04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
127495248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
127495248
NCBI-ProteinID:
XP_051717902
LinkDB
All DBs
Position
15:24765934..24819728
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AA seq
1411 aa
AA seq
DB search
MALRPGSGGGGSFMYPVGGGIAPPQGMMPMQQQQQQGFPMVQVMQPNMQGMMGMNFGAQM
PGAMPMQGGMAMGMQTPGMQFMGQPQFMGMRGPGPQFPADIQKQMAEEHQKRLEQQQRML
EEDRKRRQFEEQKQKLRLLSSVKPKSGEKSRDDALEAIKGNLDGFSRDAKMHPTPSSQSK
KPDSSPSHSSVTSHSLPPAFPDDDDEFSDFVQGPVDASSSFSSSSLPPSSPSLRAAHVNQ
PLEMGPGQHPPSSPHTVPSSLSVSPVIQHSSVISSSQSAFQGPSLEEKMFSSCDLTSDTK
AKVSFKPHQALSELSPRAQVTAQFHSSTRARNWAQTQDDFNSAFFTEMAPEPLAAAQSAS
AADRPPVQPTSVSGVGVYPQQDMQPMVPAWLYNDSLIPELFKKVLDFTMTPTGIDTAKLY
PILISSGLPREALGQIWALANRTTPGKLTKEELYTVLALIGVAQSGITVMSLDILSQFPS
PPVPNLPAMAMAINAVLPQHQQPIMTQPPVSMAMPVAAPPVMGMTPNPPAQPTASFITNF
PPVQATKADDDDFQDFQEAPKASAGDDSFTDFQGETGGAFPSMKSSSQSGVPAMLTPVSG
SSSSSSSDKYAVFKQLSVEQPAEPTAPVSDSGDKYSVFRELEHPSDRKPVGEGFADFKSV
SADDGFTDFKTADTVSPLDPPDQAKFQPTFPPPFTSSQSLSHSQPSSLAQPRNPLNMADL
DLFTTMAPPAPTSTADSKLNLFPSAPPSLVLPPTVVKPPTVGGDDFGDFALFGSSSSSEV
APAISVAGRGAGTVVQDDFADFMAFGSSRDQRSETDSGDGGGESQAETSQQRQQIGGDKY
DVFKQLSLEGGLAYDDNKESGGGSFSSLKSDNDDFADFQSSKFCTALGASDKTLVDKVAA
FKQAKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQLDMKLSDMGGDLKHVMSDSSLDLP
GLSSHQPPAAESDDLKFDPFGTSAVSSLGSYDWSDKDDLPSGQGKKLQGESQGGLPSSAV
VHRKETSFGSTENITHTTVAKVTTFPIEDGGSTAENRFEAFADFGSIEQAGQGNDDDFGD
FASTISEKSDSPPGITEAEGTQGEMTDEFGAFQGDKPKFGKSDFLKASAQSKVKSSEEMI
KNELATFDLSVQGSHKRSHSLGEKEIVRSIPSPAPEQPFRDRSNTLNEKPALPIIRDKYK
DLTGEVEESERYAYEWQRCLESALQVITTANNTLNGISSSTVCTEVIQSAQGMEYLLGVV
EVYRVTKRVELGIKATAVCSEKLQELLKDISRVWNNLMGFMSLANLTPDESSLDFSSCIL
RHGIKNAKELACGVCLLNVDSRSKTKNENTFGRLFKRALTKDSRSKLRAFNSETDNFKLM
YGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcggcccggatcagggggaggtggcagttttatgtaccctgtaggagggggc
attgcaccaccgcaaggaatgatgcccatgcagcagcaacagcagcagggcttccccatg
gtccaggtcatgcagcccaacatgcaaggcatgatgggaatgaattttggagcacagatg
cctggtgccatgccaatgcagggagggatggcaatgggcatgcagactcctgggatgcag
ttcatgggtcagcctcagttcatgggcatgaggggcccagggccacagttccctgcggac
atacagaagcagatggcggaggagcatcaaaaacgtctggagcagcagcagcggatgctg
gaagaggaccgaaagagaagacagtttgaggagcagaaacagaaactgcgtctactgagc
agcgtcaaacccaaaagtggggagaagagtcgtgacgatgccttagaggccataaaagga
aatctggatgggttcagcagagatgccaagatgcatccaacaccatcttcacagtctaag
aaaccagactcatcgccatctcattcctctgtcacctctcactcccttcctcctgctttc
cccgatgacgacgatgagtttagtgactttgtgcagggccccgttgatgcctcctcctca
ttctcctcttcatccctccctccatcctccccttcactaagagctgctcacgttaaccag
ccattagagatggggcctggccagcatcccccttcctcccctcacactgtcccttcatct
ctctctgtctcacctgtcatccaacactcttctgtcatctccagctcccaatctgcattc
caaggcccatcactggaggagaagatgttctcatcatgcgatttgacatctgatacgaag
gccaaggttagttttaagccacaccaggctctgtctgagctgagtcccagagctcaggtc
acagcccagtttcacagcagtaccagagcccgaaactgggcccaaactcaagatgacttc
aattcagccttcttcacagagatggcacctgagcctctcgccgcagctcagtcggcctct
gcggcagacagaccacccgtccagcccactagtgtcagcggcgtgggcgtctacccccaa
caagacatgcaacccatggtgccagcttggttgtacaatgactcgctcatcccagagttg
ttcaagaaggtccttgacttcaccatgacaccaacaggcattgacacagccaaactctac
ccaattcttatctcatcgggtctgccacgggaagcactcggacagatctgggccttggcc
aaccgaaccacacctggcaagctgacgaaggaagagctgtacaccgtactggccttgatt
ggagtcgcccagagtggtattacagtcatgagtttggacatcctgagtcagttcccctct
ccgcctgtgcccaatcttcccgccatggctatggccattaatgctgtcctgcctcagcac
cagcagcccatcatgacccagccacccgtgtctatggccatgcccgtcgctgcaccacct
gtcatgggaatgaccccgaacccgcctgcacaaccaacggccagcttcatcaccaacttc
cctccagttcaggctaccaaggctgatgacgatgatttccaggacttccaggaagccccc
aaagccagtgctggagatgactcattcacagatttccaaggagagacagggggagcgttc
cccagcatgaaatcatcatcccagagcggtgttcctgccatgctgactccagtgtcagga
tcttcatcctcctcctcctctgataaatatgcagtgttcaaacagctgtcagtggagcag
cctgcagagcctacagctcctgtctcagattcaggggacaaatacagtgttttcagagag
cttgagcatccttcagacagaaaaccagttggggagggatttgctgatttcaagtctgtc
agtgccgacgatggctttacagactttaaaacagccgacaccgtctctccactagaccca
ccagaccaggctaagttccagccaacttttcctcctcctttcacttcttcacagtctctg
tctcattcccagccatcctctctggctcaacctagaaatcctctcaatatggcagacctg
gacctcttcacgacaatggctcctcccgctcccacttccactgccgactccaaactcaat
ctgttcccttcagcgcctccatctctagtattgccccccacagtcgtgaaacctcccacc
gtagggggtgatgactttggcgattttgccctttttggctcctcatcatcctctgaagta
gctcctgccatttctgtagcagggagaggagctgggacggtggttcaggatgactttgct
gacttcatggcattcgggagctcaagagatcagagaagtgagaccgactctggagacggt
ggcggcgagagccaggcagagacgtcccagcagcgtcaacaaattggcggcgataagtat
gacgtcttcaagcagctttcactagaaggtggcctggcctacgacgataacaaagaaagt
ggtgggggctccttctcatcacttaagagtgacaatgacgactttgcggatttccagtca
tccaaattctgtacggcgctgggcgcatctgacaaaaccctggtggacaaagtggctgcc
ttcaagcaggccaaagaggactctgcctctgtgaagtccctggacctcccgtccatcggt
ggcagcagcgtagggaaggaggactcagaggatgcactctcagtacagctagacatgaag
ttatcagacatgggcggagacctgaagcatgtgatgtctgatagctccctagatctccct
ggtttgtcatcgcatcaacccccagctgcagagtctgatgatttgaaatttgaccccttt
ggcacatccgccgtcagcagtctgggcagctacgactggtccgacaaggatgatctccca
tctggtcaaggtaagaagctccagggagagtctcaaggtggactgccatcttcagctgtt
gtccataggaaagagacatctttcgggagcactgagaacatcacccacactacagttgcc
aaggtgaccaccttcccaatcgaagatggtggctccactgctgaaaaccggttcgaagcc
ttcgctgactttggctccattgaacaggccggtcagggtaacgacgatgactttggtgac
tttgccagcacgatttctgagaaatccgactcccctcctggaatcacagaagcagagggc
acccagggcgaaatgacagacgagtttggagccttccaaggagacaagcccaaatttggc
aagtcagatttcttgaaggccagcgcacagtccaaggtgaaatccagtgaagagatgatc
aagaatgaactcgccacctttgatttgtctgtgcagggttcccataagcgtagccacagt
ctgggagagaaagaaattgtacggtccatcccctctcctgcccctgagcagcccttcaga
gaccgctccaacaccctaaatgaaaaaccagcactgccgatcatccgcgacaagtacaag
gacctcaccggagaggtggaggagagcgagcgatatgcgtatgagtggcagaggtgtttg
gagagcgctctgcaggtcatcaccactgctaataacacccttaatggcatcagcagttcc
acagtgtgcacagaggtgatccaatcagcacaggggatggagtacctgctgggtgtggtg
gaggtgtatcgcgtaaccaagcgtgtggagctgggtatcaaagccacagctgtttgttca
gagaaactgcaggagctgcttaaagacatcagccgtgtgtggaataacctgatgggcttc
atgtcgctggcaaacctcactcctgatgagagctcactggacttctcctcctgtatattg
aggcacggcattaagaatgccaaagagttggcgtgcggagtgtgtctgctcaacgtggac
tcacgcagcaagacgaaaaacgagaacacttttggacgcctgtttaaaagagcactgaca
aaagacagtcgctccaaattaagggcctttaattcggagacggacaacttcaagctcatg
tatggaggtcaccagtaccacgccagctgtgctaacttctggattaactgcgtggaaccc
aaaccgccgggtctcatcctgcccgacctgctctag
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