KEGG   Ctenopharyngodon idella (grass carp): 127495338
Entry
127495338         CDS       T08802                                 
Name
(RefSeq) cullin-3b
  KO
K03869  cullin 3
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04120  Ubiquitin mediated proteolysis
cide04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127495338
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    127495338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cide04121]
    127495338
   03400 DNA repair and recombination proteins [BR:cide03400]
    127495338
Ubiquitin system [BR:cide04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     127495338
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127495338
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 127495338
NCBI-ProteinID: XP_051718070
LinkDB
Position
15:8736125..8776678
AA seq 766 aa
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVIHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQDSFN
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLTSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPIKKEDGSDMVGGAQVTGSNTRKHILQVSTFQMTIL
MLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIESGHVFTVN
DQFTSRLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKKMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtcaaatctcagcaaagggggcactaaaaaagacaccaagatgaggatacgagccttt
cctatgaccatggatgagaaatatgtcaacaacatatgggacctcttgaaaaatgctatt
caggagatccagaggaaaaacaacagtgggctgagctttgaggagctctacaggaatgcc
tacaccatggtactacacaaacatggagagaagctctatacaggcttgagggaggtggtc
acagaacatctcatcaacaaagtacgtgaggatgtgttaaactccctgaataacaacttt
ctgcaaacactgaatcaagcctggaatgaccaccagacggctatggtgatgatcagagac
atcttgatgtacatggaccgggtgtatgttcagcagaataatgtagagaacgtctataat
ctaggtctcatcatcttcagagaccaggtggttcgttatggttgcattcgggaccatcta
aggcagaccttactagacatgattgcccgtgagagaaaaggagaggtggtggacaggggt
gccattcgtaacgcttgtcagatgttgatgattttgggattggaaggacgttccgtttat
gaagaggattttgaggccccattcttagaaatgtctgctgaattctttcagatggaaagt
caaaagtttttagctgagaacagtgcaagtgtgtacataaagaaagtggaggcacggata
aacgaggagattgagcgagttatacactgtctggataaatcgacagaggagccaattgta
aaggtggtggagcgagagctcatctccaaacacatgaagaccattgtagagatggagaac
tctggcctggtacacatgctcaagaatggaaagacagaagatctggcctgcatgtacaag
ttgttcagtagggtgccaaatggcctgaagaccatgtgcgagtgtatgagctcatatctg
agggagcaaggcaaagctctggtgtctgaggaaggagaaggcaagaaccctgttgactac
atccagggccttctcgatctgaagtcacggtttgatcgcttcttgcaagactcctttaac
aacgaccgtttattcaagcagaccatcgcaggggactttgagtacttcttgaacctgaac
tctcgttcacctgagtatctctcgctcttcattgacgataagctgaaaaaaggagtgaaa
ggactgacagagcaggaggtggagtctatcttggataaagccatggttctgttcaggttt
atgcaggagaaggatgtgtttgagcgctactacaagcagcacttggccagaagactcctc
actaacaaaagtgtctctgatgactcagaaaaaaacatgatctcaaagctaaagacggag
tgtggctgtcagttcacatccaaactggaaggcatgttcagggacatgagcatctcaaac
acaaccatggatgagtttcggcagcaccttacgtcaacaggggtgtctttaggtggcgtt
gatctcacagtgagggttctaacgacaggatactggccaacacagtccgcaactcccaaa
tgtaacatccccccttcaccaagacatgctttcgaggtctttagaaggttttatttggcc
aagcacagtggtaggcagctcacattgcagcatcacatgggttcagcagacctcaatgcc
accttttatgggccaataaaaaaggaggatggctcagatatggtcggtggggctcaggtt
acaggctctaatactaggaaacacattctgcaggtttctacattccagatgacaatcctc
atgcttttcaacaaccgagagaagtccacatttgaggagattcagcaagagaccgatatc
ccagagagagagctggtgcgggcactgcagtctctggcctgtggaaagcccacacagcga
gtcctcacaaaagaacccaagtcgaaagagatcgagagtggccacgtgttcactgtcaat
gaccagttcacctccagactgcacagagtcaagattcaaacagttgcagccaaacaggga
gaatcggaccctgagaggaaggagacacgacaaaaagtagatgacgacaggaaacatgaa
attgaggcggctattgttcggatcatgaagtccagaaagaaaatgcagcacaatgttcta
gtagcagaggtaacccagcagctgagggcacgattcctcccaagtcctgtggtcattaaa
aagcgtattgaaggacttattgagagagaatacttggcaagaacaccagaagatcgcaaa
gtgtacacatacgtagcatga

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