Ctenopharyngodon idella (grass carp): 127495357
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Entry
127495357 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127495357
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
127495357
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
127495357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
SAP
Prok-RING_4
MUG2_C
zf-RING_5
HeH
Ish1
FYVE
zf-C3HC4_2
DUF6964
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
127495357
NCBI-ProteinID:
XP_051718116
LinkDB
All DBs
Position
15:complement(10305728..10333055)
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AA seq
347 aa
AA seq
DB search
MWASCCGWLCLDDSTVEETRSSTQHQAFTNSGFSSYPSPPAPEHTCKACGGRFDSLARKH
MCMDCKKNYCSRCSTQQDLQPWLCHTCQRFRGILFERAELMRLKVKDLREYLHLHGVPTQ
MCREKEELVELVLGQQTPTSDTHIPPPVTTRLDPQEAPNTPVITASPSGNNGTTELGPPI
QTTEDGQSLAEATAESEMDDELQVEQEMQSSDSEEVLAPGRRASLSDLRSVDDIEALSVR
QLKEILARNFVDYKGCCEKWELMERVTRLYHDQKDLQNMVSIAIEGTDTGSGMAVEENLC
KICMDSPIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccagctgctgcggctggctctgtctggatgattccactgtggaggaaaccaga
agtagcacacaacatcaggccttcacaaactctggcttcagcagttacccatctccccct
gctccagaacacacgtgcaaggcctgcggaggtcgctttgacagcctcgccaggaagcac
atgtgcatggactgcaagaaaaactactgcagccggtgttccactcagcaggacctccag
ccatggctgtgccacacttgccagcgtttccgtggcatcttgttcgagcgagccgagctg
atgagactcaaggtgaaggatctgagggagtacctccacctgcacggggtccccacacag
atgtgccgtgagaaggaggagctggtcgagctggttcttggccaacagacacctacatct
gacacgcacattccacccccagtaaccacacgcttagacccgcaggaagcccctaacact
ccagtcattacagcaagcccgtcggggaacaacggcacaacggaactgggacctccaatt
caaacaacagaagatggacagagcttggctgaggcgacagctgaaagcgagatggacgat
gagctgcaggtggagcaggagatgcagtcttcagactctgaagaagtgttggctcctggg
cgacgggcgtccctctcagacctcagatcggtggatgatattgaggctttgagtgtccgg
cagttgaaggagattctggccaggaactttgtggactacaagggctgctgtgagaaatgg
gaactgatggagagagtcacgcgtctctaccacgaccagaaagacctgcagaacatggtg
tccatcgccatagaaggcacagacactggatctgggatggccgtggaagagaacctgtgt
aagatctgcatggactcgcccatcgactgtgttcttttggagtgcgggcacatggtcaca
tgcacaaagtgcggcaagcgcatgagcgaatgtcccatctgccgacagtatgtggtgcgg
gcagtgcacgtgttcagatcctga
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integrated database retrieval system
