Ctenopharyngodon idella (grass carp): 127495450
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Entry
127495450 CDS
T08802
Name
(RefSeq) integrin beta-1-like isoform X1
KO
K05719
integrin beta 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03271
Virion - Rotavirus
cide04145
Phagosome
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04514
Cell adhesion molecules
cide04530
Tight junction
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
cide05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
127495450
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127495450
04514 Cell adhesion molecules
127495450
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127495450
09144 Cellular community - eukaryotes
04510 Focal adhesion
127495450
04530 Tight junction
127495450
09142 Cell motility
04820 Cytoskeleton in muscle cells
127495450
04810 Regulation of actin cytoskeleton
127495450
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127495450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127495450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127495450
04515 Cell adhesion molecules [BR:
cide04515
]
127495450
04090 CD molecules [BR:
cide04090
]
127495450
Membrane trafficking [BR:
cide04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
127495450
Exosome [BR:
cide04147
]
Exosomal proteins
Proteins found in most exosomes
127495450
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin beta subunits
127495450
CD molecules [BR:
cide04090
]
Proteins
127495450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
PSI_integrin
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
127495450
NCBI-ProteinID:
XP_051718273
LinkDB
All DBs
Position
2:34041365..34091132
Genome browser
AA seq
799 aa
AA seq
DB search
MDVRLLLISVLLGLSRAQIDVNECTKASAQSCGECIQAGEKCGWCTDENFLKQGEQKSTR
CDELDALIKKGCSNASIENPRGTVRVNKNQPVTNRTKDGVKLKPDQITQIQPQKLTLDLR
SGEAQTFPLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTQLMKKMQTITSDFRIGF
GSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTEDGSQFNNLVSRQQISGN
LDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLQ
DNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTKEFQPVYQELKNLIPKSAVGTLTSDS
NNVIDLIIDAYNSLSSEVILENSRLPEGVSISYVSHCKNGVSEKGENGRKCSNISIGDEV
TFEVAITAKGCPSNGKSETIKIKPLGFTEEVEIVLNFICECECHKDGIPNSPACHFGNGT
LECGACRCNEGRIGRTCECSKDEVRTEDLDANCRMDNGTDICSNNGDCVCGTCECKKRDN
PEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTSTCLASN
KQICNGRGTCECGVCKCSDPKFQGITCEICPTCPGVCTEHKDCVQCRAFGTGDKKDTCEK
ECGGLNLKVVKKKEDLPQPNDQPYINHCKERDANDCWFFFTYATKEDGTMEVHVAEDLEC
PSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQENPIY
KSPINKFQNPSYGNKGVTL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaggctgctcctgatttcagttctgcttggactcagcagggcacaaatagat
gttaacgaatgcaccaaggcctcggcccagtcctgtggtgaatgcattcaggccggagaa
aaatgcggctggtgtacagacgagaactttctgaaacagggtgagcagaaatccacacgc
tgtgatgagcttgatgctctgattaagaagggctgttctaatgccagcatagaaaatcct
cggggaacagttagagtcaacaagaaccaacctgtaacaaaccgcacaaaggatggagta
aaactgaaaccagaccagatcacccagattcagccacagaaactcaccctagacctccga
tcaggtgaagctcagacgtttcctctgaaattcaagagggctgaggattatcccatagat
ctctactacctgatggatctcagctactctatgaaagacgatttagagaatgtcaaaaac
ctgggaacccaactgatgaaaaaaatgcaaacaatcacatctgacttcaggattggtttc
ggctcctttgtggagaaaactgtcatgccatacatcagcacgacaccagccaagctgctg
aacccctgtacatcagaccagaactgcaccagcccgttcagctataaaaatgtgctgagt
ctgactgaggatggatctcagttcaataaccttgttagcaggcagcagatctcaggaaac
ctggactcaccagagggagggttcgatgccatcatgcaagtggctgtctgcgcgaatcag
atcggctggaggaatgttacccgtctgcttgtgttttccacggacgctggattccacttt
gctggagacggaaaactaggcggcatcgtgcttcctaatgacgggaagtgccatctgcag
gacaacatgtacaccatgagccattactatgactatccatccattgcacatcttgttcaa
aaattaagcgaaaacaacattcagaccatttttgcagtaactaaagagttccagcctgtt
taccaggagctgaaaaacctcattccaaagtcagctgtgggcacactaacctctgactcc
aacaacgtgatagacctcattattgatgcatataattctctgtcctctgaggtcattctg
gagaacagcaggctgcctgaaggtgtgtccatctcctatgtgtcccactgcaagaatgga
gtgagtgaaaaaggagaaaatgggagaaagtgctccaacatctccattggggatgaggtg
acgtttgaggtagcgatcacggctaagggttgtccatctaatggcaagtcagagacgata
aagatcaagccactgggcttcactgaggaggtggagatcgtcctcaacttcatctgtgaa
tgtgagtgtcataaagacggaatcccaaacagcccagcgtgtcacttcggcaacggtacc
ctggagtgtggagcatgcaggtgcaatgagggacgtatcggcaggacttgtgaatgtagc
aaagacgaggtgagaacagaagatctagacgcaaactgccgcatggataacggcacagac
atctgcagcaacaatggagactgtgtttgtgggacttgtgagtgcaaaaaaagagacaac
ccagaggagagatacagcggaaagttctgcgagtgtgacaacttcaactgcgaccgctcc
aacaacaagctctgtggaggtcatggtcgttgtgaatgccgaaagtgtatctgtgatgct
aactacaccggcagtgcatgcgactgctctttggacacctccacctgtctggccagtaac
aaacagatctgtaacggtcggggcacctgcgagtgtggcgtatgtaaatgttccgaccca
aagtttcagggtataacctgtgaaatctgcccaacgtgccctggagtttgtactgagcac
aaggattgcgtccagtgccgagcatttggtactggtgacaagaaagacacatgtgagaaa
gagtgcggtggcttaaatcttaaagtagtgaagaagaaggaggatcttcctcagcccaat
gaccagccctacatcaatcactgcaaagagcgggatgctaacgactgttggttcttcttc
acctatgctaccaaggaagacggcaccatggaggtccatgtggcggaggatcttgagtgt
ccctctggccctgacatcatccctatcgtagcgggtgtggtcgcaggaatcgttttgatt
ggtttagcgcttctgctcatctggaagctgctcatgattattcatgaccgcagagagttc
gccaagttcgagaaggagaaaatgaatgctaagtgggatgcgcaagagaacccaatatac
aagagtcccattaataaattccagaatccaagttatggaaataagggcgtcacactctga
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integrated database retrieval system
