Ctenopharyngodon idella (grass carp): 127495462
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Entry
127495462 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04270
Vascular smooth muscle contraction
cide04625
C-type lectin receptor signaling pathway
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127495462
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127495462
09153 Circulatory system
04270 Vascular smooth muscle contraction
127495462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127495462
Membrane trafficking [BR:
cide04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127495462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
127495462
NCBI-ProteinID:
XP_051718286
LinkDB
All DBs
Position
15
Genome browser
AA seq
1396 aa
AA seq
DB search
MSDTRSTVTDRTSSILSRDHPPDKRAKSDKLPGTPTHEFDPTDVLVQKSGFVVADRRPES
CGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTQS
NHVEVVNLIKSGSYVALTVLGRPPGLPQIPLSEVNVGLGSPGVFRGPFXVTSPNSYNAVE
RTSSPLVPWEENSASHNQRLDNKRMVSKEQQYIQGLREDYSRTPTAKPLRDIQEAKKHIP
HQQGQLNRATHEGLCLRNSEDGYWVDEDQYKGDFSPEGFWSGSSVSAVQRQFCPASPESQ
RDSNCSSPKSTPRDSLNSCPSPEVEDGSDLDSRFQSSIGSPPSRLASEIIAAEDDDFDTE
QEQVNGQCSCFQSIELLKTRPAHLAAFLHHVISQFDPAPLLCYLYADLYKQTNSKEMRRI
FMDFLTFFIDRGANLKVAVPESISTELERRRPELIPEELHRQYIQTMQEMLLPDVQRNLE
DFRQKRSMGLTLADVELSRLDSEQLAVERERSCAENILSKIDDILSSSQPTEEEKCTTIQ
YVIFMYMKHLGVRVKEQRNLESKRVRINFLPSKLRKSKTEKEGEEKLKRPRFPIRVPPRW
PSRIDSVPSGRAGDNIKQRPLKQMSQPAMGGSDLIEGGRLRGSQSSEGSDLLQSPGLITS
PPFNTSYSSPTDPSVRDPEFNMSPSAVVPRLSDGVQSGDVLDSIYPPCDYIPYNMDQLDE
DRDGDRLLDVGTPKLSRRFEELQSEDDQGSDVYSDVDPPNWQQLVGRDVLAGLTPHEIKR
QEVINELFYTERAHVRMLKVLDSVFYQKLTRENILPPADIKNIFTNLEEIIQLHMRIADQ
MTAIRKKNESSVIDHIGDELLSWFSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDQRF
TSFMQEAESNRLCRRLQLKDIIPAEMQRFTKYPLLMDNIAKYTDESGEKDKVRRSAECCR
QILNHVNQSVKESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSW
KINKDKTIELYTLLLEDILVLMQKQDERLILRCHSKNLAGTADTKHIFSPIIKLSTVLVR
SVATDNRSFFVISMSKNGAQIYELMAQTVSEQRMWQRQIAQRAEVMNAKPHSVIPLPQHD
GDRDGVELSKFSKGSERISTGSIQSAEKDGEFSPSAALRDCVPDSNPGEEDQVPRAGRDG
SYLDSELLNGRDADSLSSSSKADEALKTLAALKQVLVTQLMAQDEGERLGRSAGSRLLRT
TSLRTPVEHSSARTPSRAQDYTSGDTGFYECPEDYAYLVLEGYGGSGESSTDDDIQVGRK
EPSLAHSCAADSGISLKFSSPSSGSTSRLSRQVLSHLRCLQANLNHLKEMETKYYNLLRQ
RPVGSSTEGDESRDKK
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacggtccacagtcactgacagaaccagtagcattctcagcagagaccac
cctcccgacaagagggccaaaagcgataagctgcccggtacccctacacatgagtttgac
cctacagatgtgctggtgcagaagagtggatttgtagtggctgacaggagacctgagtct
tgtgggctggttcagagatgtgtgatcattcagaaagatgagaacggctttgggctgacc
gtcagtggggacaaccctgttttcgtacaactcgtcaaacaggatggagctgccatgcgt
gcaggtgttcagacgggggacaggatcattaaggtgaacgggaccttggtgacacaatca
aaccatgtggaagtggtgaatttaatcaaatccggttcttacgtggccctcacagtatta
ggccgacctccggggttgccccagatccccctctctgaggtaaatgtgggtctcgggtca
ccaggggtgtttcgaggaccctttnntgttacatctcccaattcttacaatgcagtggaa
cgcacctcctctccccttgtaccatgggaagagaacagtgcttcacacaaccaaagattg
gacaacaagaggatggtgtctaaggagcaacagtacatacagggactaagggaggactac
agcagaactcctacagccaaaccactacgggatatccaggaagccaagaagcacattcca
catcagcagggccagctcaatagggctacacatgagggtctgtgtctcaggaacagtgaa
gatggctattgggtggatgaggatcaatataagggagattttagcccggagggtttctgg
agtggaagttcagtatcagctgttcagcgccagttctgtccggcctctccagagagccaa
agggactccaactgttccagtccaaagagcacccccagagacagcctcaactcctgcccg
tcccctgaggtcgaggacggctctgacctggattctcgtttccagtcctccatagggagc
ccaccctcccgcctggcttcggaaatcattgctgctgaagatgatgactttgacacagag
caagagcaggtgaatggccagtgcagctgcttccaaagtatcgagctgctcaagactcgc
cccgctcatcttgccgccttcctgcaccatgttatctcccagtttgaccctgcgcctctg
ctttgctacctgtacgctgacctctacaaacagactaactccaaagaaatgcgccgcatc
ttcatggacttcttgacgttcttcatagaccggggggcaaatttgaaggtcgctgtgcct
gaatccatctccactgagctcgagcggcggagaccagagctgattcctgaggaattacac
aggcagtatatacagacaatgcaggaaatgctccttcctgatgttcagagaaacttggag
gacttcaggcagaagcgcagtatgggtttgaccctggctgatgtagagctgtctcgcctg
gactctgaacagctggctgtagagagagagagatcctgtgctgaaaacatcctctccaag
atagatgacattctgtcgagttcacaacccacagaagaggagaaatgcaccacgatacag
tatgtgatcttcatgtacatgaagcatctgggagtgcgggtgaaagagcaacgaaacctg
gagtccaaacgagttcgaattaatttccttccttccaaactgaggaaaagcaaaacagaa
aaggaaggggaggagaaactgaaaagacctcgcttccccatccgggttcccccgcggtgg
cccagtcgcatcgattcggtaccgtctgggagggccggggacaacatcaagcaaaggcct
ctgaaacagatgtctcagccagcgatgggtgggtcagacttgatagagggtggacgtctg
cggggcagtcagtcgagtgagggctcagacctcttacagagcccggggttgatcacctct
ccccccttcaatacctcttacagctcaccaacagacccctctgtcagggacccagagttt
aatatgagcccatctgcagtggttccccggcttagtgatggggtgcagtctggagatgtg
ctggacagcatctacccgccctgtgactacatcccatacaacatggaccagctagatgaa
gacagagatggagacagactccttgatgtgggcacacctaaactcagtagaaggtttgag
gagctgcagagtgaggatgatcaggggagtgatgtttactctgatgtagatcctccaaac
tggcagcagctggtcgggcgtgatgttttagctggcttgacaccccacgagatcaagaga
caagaagtcattaatgaactgttctacacggagcgagcccatgtacgcatgttgaaggtc
ctagacagtgtcttctaccagaaactcacccgagaaaacatactgccccctgctgacatc
aagaacatattcaccaacctggaggaaatcatccaattgcatatgaggatagcggatcaa
atgacagcgatacgcaagaagaacgagtcgtcagtcatcgaccacataggagatgagttg
ttgtcttggttcagtggtggagaggaggagaagatcaagcaagcagtgggcactttctgc
agtaaccagcccttcgccctggagctcatcaaatcccggcagaagaaggaccagcgtttc
acctccttcatgcaggaggctgaaagcaatcgcctgtgtcgacgactacagctaaaggac
atcatccctgcagagatgcagaggttcactaagtaccccctactgatggacaacattgcc
aagtacacagatgaatcaggagagaaagacaaagtgagacgatcagccgaatgctgtcga
caaattctcaaccacgtcaaccagtctgtgaaggagtccgagaataaacagagactggaa
gactaccagagacggctggacctctcttccctcaagcagagcgagaaccccatgatctca
gagtttaagaatctggatctcactaaaagaaagatggtccatgagggtcctctgtcctgg
aagattaacaaagacaaaactattgagctatatactttactcctggaagacatcctggtg
ctgatgcagaagcaggacgagcgtcttattctcaggtgtcacagtaagaacctcgcagga
acggctgacacgaaacacatattcagtcccatcatcaagctcagcactgtgctggtgcgc
tcagtggcgacagataacagatcattttttgtgatctccatgtccaaaaatggagctcag
atctatgagctgatggcccaaacagtgtccgagcagagaatgtggcaacggcagatcgcc
cagagggcagaagttatgaacgccaaaccacacagcgtcattcctttgcctcagcacgat
ggcgacagagacggtgtcgagttaagcaagttcagcaaaggctctgaacggatctccaca
ggaagcatccagtccgcagagaaagacggtgaattctcgccctcggcagccctgcgggac
tgtgtcccagactccaaccctggggaagaggaccaggtcccgagagctggcagggatggc
tcgtatctggactctgaactcttgaacggcagggacgcagactctctatcctcttcatct
aaagcagatgaggcccttaaaaccttggcggcgctgaagcaggtgttggtgactcagctg
atggctcaggatgagggcgagcgattgggccgatcggccggcagtcgtctcctcaggacc
acctctctacgcacaccagtggagcacagctctgctcgcacccctagtcgagctcaggac
tacacttctggagatacgggcttctacgagtgcccagaagactacgcctacctggttctg
gaggggtacggcggctcaggcgagagcagcacagatgacgatattcaggtcgggagaaag
gagccaagtttggcacacagctgtgctgccgactcgggcatcagcctaaagttctcctcg
ccctcctcaggcagcacgtctcgcctcagcagacaggtcctctcacatcttcgctgcctg
caggccaacctcaaccacctcaaggagatggaaacaaagtattataatctacttcgccaa
aggcctgttgggtcatccacggaaggtgacgagagcagagataagaaatag
DBGET
integrated database retrieval system
