Ctenopharyngodon idella (grass carp): 127495490
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Entry
127495490 CDS
T08802
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127495490 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127495490 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127495490 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
cide03029
]
127495490 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127495490 (si:ch211-11n16.2)
Membrane trafficking [BR:
cide04131
]
Autophagy
Other autophagy associated proteins
Others
127495490 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
127495490 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
GBP
FYVE_CARP1-2
MMR_HSR1
AIG1
Motif
Other DBs
NCBI-GeneID:
127495490
NCBI-ProteinID:
XP_051718364
LinkDB
All DBs
Position
15:20117197..20130963
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AA seq
654 aa
AA seq
DB search
MSEMLLKDMDEISLGPAKMDEQKENGRSFLLVDENESLQVKNEGYFLQRLGCSAAQAVKV
LSIFGNTGDGKSHTLNHVLFDGEEVFATSPSPSSCTVGVWAAYDPHLNLIVLDTEGLLGA
ASQQNRRMRLLLKVLAVSDVVVYRTRAERLHNDMFQFLGSASAAYLKHFTPELRSLSNRC
GLDVPLSSLGPAVIVFQETSRTQLLGQDASALGQADTLLQKRFHDLGQSTDAFSSVQYVG
TQTITPPTDYSQLLQIVNQQVNNTSQRAPRQPAIVFSALKALSDRFCGEISDDKISICSF
FPDEYFTCPSVCLSCNVRCKNGMNHQKDAVPHMADGLCQYAHQYNNKVLICKKCYEGGRE
VIVVPKTSASTDNQWLGLAKYAWSGYVLECASCGIIYRSRQYWMGNQDPESSVVRPEVKH
VWQDNGGFQTDHQNAAQRVLDGVNYIIQSVSEYSSGPTKAVAAWLTDQVAPPYWKPNAEI
IKCHGCKRAFEEAERKHHCRACGEGFCQACSTHSMPVPERGWGGTPVRVCDECYRQGGPQ
QTGQVANTETRTLVARRVTEVAQSTLDMVSTAVDYPLCFVKGVARPDYWIPDHEITQCHC
CAKRFIPSMSKHHCRACGEGVCGNCSSKTRPVPSRGWDHPVRVCNDCADRSDSL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaatgctactgaaagatatggatgagattagtctcgggcctgctaagatggac
gagcagaaggaaaatggccggagttttctcctggtggacgaaaacgaaagcttgcaggta
aagaacgaaggctattttctgcagaggttgggctgcagtgctgctcaggcagtcaaagtg
ctttccatcttcggcaacacgggcgacggcaagtcccacactctcaaccacgtgcttttc
gatggcgaggaggtatttgccacatctccgtctccatcctcatgcacggtgggcgtatgg
gccgcttacgatcctcacctgaacttgatcgtactggatacagagggcctgcttggtgcc
gccagtcagcagaaccgccggatgcgtctgctgctgaaggttctggccgtatcagacgtg
gtcgtttaccgcacaagggctgagaggctgcacaacgacatgtttcagttcctcggcagc
gcgtcggccgcttacctgaagcactttacacctgagctccgctctctgtctaaccgctgc
gggctggacgtgcctctctccagcctgggacctgctgttatagttttccaggagacttct
cgcactcagctgctaggccaagatgcctctgccctggggcaagcagacacactgctgcaa
aagcgcttccatgacttaggccagagcacagacgccttcagctccgttcagtatgtgggc
acccaaaccatcactccccccacagactactcgcagttactgcagatagtcaatcagcaa
gtgaacaacacatcccagcgagccccgcgccagcctgccattgtgttcagtgcattgaag
gccttgagcgacaggttctgtggcgagatctcagatgacaaaatcagcatatgctcattc
tttcctgatgaatatttcacttgcccatcagtctgtctcagctgcaatgttcggtgtaaa
aatggcatgaaccaccagaaggacgctgtcccgcacatggctgatggattgtgtcagtat
gcccaccaatacaacaataaagttctcatctgtaagaagtgctatgagggcggaagggaa
gtgattgttgtacccaaaacatctgcctctacagataaccaatggcttggtctggccaag
tatgcatggtcaggctatgttttagagtgtgccagctgtggcatcatctaccggagtaga
cagtactggatgggcaaccaggatccagagagcagtgtggtgcggccagaggtcaagcat
gtctggcaggataacggtggcttccagacagaccatcagaatgcagctcagcgggttttg
gatggagtgaattacataatccagtcagtgtcagaatatagctcaggcccaaccaaagct
gtcgctgcctggctcacagaccaggtggctccgccctactggaaacccaacgctgaaatc
attaaatgtcacggttgtaagcgagcgtttgaggaggcggagaggaagcaccactgtcgg
gcatgtggcgaggggttctgtcaggcctgctccacccacagcatgccagttcctgagagg
ggttggggcggcacccctgtacgagtgtgtgatgaatgttaccggcagggaggaccccag
caaaccggacaggtggccaatacggaaacccggacactagttgcccgcagagtgacggaa
gtagctcagtccactctcgatatggtctccaccgcagttgactatcctctctgtttcgta
aagggggttgcaagaccagactattggatcccggaccatgagatcactcagtgccactgc
tgtgctaaacgcttcatccccagcatgtccaagcaccactgcagggcatgtggggaggga
gtgtgtgggaactgctccagtaagaccaggccagtgccctctcgtggctgggaccaccca
gtgcgagtgtgtaatgactgcgctgaccgcagtgattccctgtga
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