Ctenopharyngodon idella (grass carp): 127495557 Help Entry 127495557         CDS       T08802                                  Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04510   Focal adhesion cide04512   ECM-receptor interaction cide04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cide00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127495557  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127495557   09142 Cell motility    04820 Cytoskeleton in muscle cells     127495557  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cide04147]     127495557    00536 Glycosaminoglycan binding proteins [BR:cide00536]     127495557 Exosome [BR:cide04147]  Exosomal proteins   Exosomal proteins of other cancer cells    127495557 Glycosaminoglycan binding proteins [BR:cide00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127495557 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  127495557 NCBI-ProteinID:  XP_051718441 LinkDB All DBs Position 15:complement(1914368..1992315) Genome browser AA seq 1691 aa AA seqDB search MTRPRRISSTSLCTKLLLALVMIHTAFGGDKTEECGGRDCSVCQCFPPKGERGSPGDLGR QGPQGPPGWPGIAGLCGEKGQHGFIGFPGDSGPAGDQGVKGVKGHGGLDGVPGHPGPGGL PGLPGKDGCNGTKGECGLNGEIGRPGNPGPKGLPGLKGIKGDPSYRTIYNPGTPGVNGSP GIRGPQGLKGFCGPRGPPGRVGPDGHLGLQGFPGPRGPPGDPGRSLPGPKGDEGDQGPQG NPGPFEYVEPNPEDYVKGDKGNKGQRGICGVRGPTGLEGPPAEKGEKGIIGFTGPRGPPG FPGRTGFQGPKGKLGDNGLPGLFGNPGQKGFPGDPGPKGNPEEYYYPVTGPPGDPGLPGA AGPPGDRGMMGIPGPLGDPGASVPGAMGESGLQGLSGLKGEKGEPGKINGSPLKYDNLFG EQKKYPYYGSPDGTPGEPGKPGHPGSKGQPGNPGSPGYYCLPGERGEPGHDGQRGPLGLQ GVKGRKGPEGGCACDPPGDLPGDPGPPGCPGDPGDQGQKGFRGPRGEIGLIGERGVGGVT GPRGFTGLRGIKGEKGGVMVSCTKGVKGDKGSLGAYGRPGYNGKKGADGKIGAPGDPGPL GDDLAGLPGDRGCQGAVGTKGFRGPTGPPGPCMMGSIGQRGQQGDPGPQGHTGPPGPKGV QGDTMPCGPGIPGAPGCKGMPGCIGKKGTLGNPGCIGQVGPDGLKGENGDPGDCGICGLK GPDGCLGDPGDTGPDGNSINGSPGVPGCRGPQGLKGSSGDCVIGAPGPMGPCGVQGCQGP KGVPGPCGPIGLQGTSGVPGLPGRKGEKGEDGTPGAPGCPGGRPEQCDKGQAGPPGNTGP PGFIGPRGKPGEKGSLGEQGPPGVGAKGCPGKPGVPGIQGCTGLQGPSGLNGDSGNPGCT GPKGLPGFPGQDGCPGNTGQTGPIGCLGPKGLRGLNGCPGFPGVNGTKGQKGCRGPPGPP GDMISVQVKGQVGPPGPHGENGFCGERGNKGDPGLPGQPGYPGLNGPPGFESGCRGPPGI PGLCGEPGERGQPGPRGIDGFPGECGDPGDPGLTGLAGIPGFPGFDGPKGEKGESIGEPG RTGERGSCGEKGASAPPGDKGDCGDPGPRGPNGNCGPPGPPGDNGPCGPRGVVGPPGPCG RHGPEGPEGPPGPPGPKGNPGCPGLRGPQGMQGIHGLDGLKGDKGEIGSRGLGLIGERGN PGPCGDKGDPGDPGLCGQSQNGVQGPNGPPGCRGDPGPMGPPGFRGEECKILKPGPCGQQ GYCGPDGPPGPMGEIGEPGNVFTVCGDFGCPGDPGSPGCKGEKGCSGPNGLPGCPGQEGA KGERGQCGPMGLPGPCGPMGNCGPPGSCGEKGEKGDTGLKGQPGDVRTTYTPCPTPLGGL PGARGPPGPVGESGKDGPNGSEGLKGIKGSKGDDGSPGPLGPVGPDGPLGYRGDEGERGP KGSQGPPGPRGDKGPPGMNERFSSGFLLVKHSQSDIVPTCPLGLTQLWIGYSLLYLEGQE RAHTQDLGQAGSCIPMFSTMPFSCCNMNSCDYASRNDKSYWLSTTASIPMMPMKGMEIQP HISRCVVCEAASPTIAIHSQDRSTPSCPPNWTSLWTGYSFIMYTGAGDEGGGQSLTSTGS CLQDFRSLPFVECQGSLGTCKYFATIYSFWLTRVDTQGFNSNPHSTVLQTEREKRESVSK CSVCMMNDPNK NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt atgacacgcccccgccggatctcctcgaccagcctctgcacaaagcttttattggcactt gtgatgatacacacagcttttgggggggacaagacagaagagtgcggaggtcgagactgc agcgtctgccagtgtttccccccgaaaggagagaggggaagtcctggtgacttaggtcgg cagggcccccaggggcccccaggttggcctggcatcgcaggactttgcggcgagaagggt caacatggattcataggattccctggggattctggcccggcaggagaccagggtgttaaa ggagttaaaggccatggtggattagatggagtgcctggtcatccggggcctggtggtctt cctgggcttccagggaaggatggctgtaatggaaccaaaggggaatgtgggttgaatggt gaaataggacgacccggcaacccaggacccaagggactacctgggttaaaaggtatcaaa ggagacccctcttataggacaatttacaatcctggaactcccggtgttaatggatcacca ggaatacgtggaccacaaggacttaaaggattctgtggccctcgaggtccaccaggacgc gtgggacctgatggacatttgggcttacagggttttccaggtccaagaggcccaccggga gatccaggaagatcactgcctggaccaaaaggagatgagggggatcaaggtcctcagggg aatccaggtccatttgaatatgtagagcccaacccagaagactatgtaaaaggcgataaa ggaaataagggacaaaggggaatttgtggagttcgtggcccaacgggtcttgaagggcct ccagcagaaaaaggagagaaaggcataattggttttactggacccagaggcccacctgga tttccaggccgaacggggtttcaaggacccaaggggaaacttggggataatggtctccct ggtctatttggcaatccaggacaaaagggctttccaggtgaccccggacctaaaggaaat ccggaggaatattattaccctgtgacaggaccacctggagatcctgggctccctggtgct gccggaccacctggggatagagggatgatgggtatacctggtcccctgggtgatccagga gcatctgtaccaggtgcaatgggtgaatctggtctccagggtctcagtggactcaaagga gaaaagggtgaaccaggaaaaataaatgggtcacccttgaaatacgataatttatttggg gagcagaagaaatacccatactatggctctccggatggcactcctggggaacctggaaaa ccgggccatcctggaagtaaaggacaaccaggaaatcctggcagtcctggttactactgc cttcctggtgaacgtggagaacctggacacgatggacagagagggcctttgggattacaa ggtgtcaaggggagaaaaggtcctgaagggggatgtgcatgtgacccacctggtgatcta cctggtgatcctggccctccaggctgtccgggtgaccctggtgatcaggggcaaaaaggg ttccggggtcccagaggtgaaatcggactcatcggagagaggggtgtgggaggtgtaact ggtcccagaggcttcacaggtctcagagggattaaaggagagaaaggaggtgttatggtg tcatgcacgaagggggtgaaaggtgacaaaggatctcttggagcatatggaaggccaggg tataatgggaagaaaggggctgatggaaagattggtgctcctggagatccaggacctctg ggagatgatcttgctggactgccaggtgacagggggtgtcaaggagctgttggtacgaaa ggcttcagaggtccaactggtcctcctggaccatgtatgatggggtcaattgggcaacga gggcaacaaggggaccctggacctcaaggccatacagggccccctggtcctaaaggggtt caaggtgacacaatgccctgtgggcctggtatacctggagctcctggttgcaaaggaatg cctggatgtataggtaagaaaggtacacttggaaatccaggatgcataggacaagttgga ccagatggtctgaagggagagaacggagaccctggcgattgtgggatttgtggactgaaa ggtccagatggatgtttaggagatccaggtgacactggccctgatggcaacagtatcaac ggctcacctggcgtacctggatgtcgtggaccccagggtctgaaggggtcttcgggagac tgtgttatcggggctccaggaccgatggggccctgtggggttcagggatgtcaggggcct aaaggtgtacctggaccatgtgggccaattggattgcaaggtacatctggtgttcctgga cttcctggaagaaaaggggaaaaaggagaagatggtacaccaggagcacctggttgtcca ggtggaagaccggaacaatgtgataaaggacaagctggtccacctggcaacacaggacca ccaggctttattggaccgagaggcaaacctggagagaaaggatcacttggggagcaggga cctccaggcgttggagctaaaggatgccctggaaagcctggtgtccctggcattcaagga tgcacgggccttcagggaccttcaggactcaacggagacagtggaaatcctggatgtact ggaccgaagggtttgcctggatttcctggtcaagatggatgtcctggcaacacagggcaa acgggccctatagggtgtcttggaccaaaaggccttaggggtctcaatggatgtccaggt ttcccaggggtaaatggaaccaagggccagaaaggatgccgtgggcctcctggacctcca ggagacatgatttccgtgcaggtcaaaggccaggtagggccacctggacctcatggggag aatggtttctgtggagaaaggggtaataagggtgatccaggtctgcctggacagccaggg tatccaggacttaatggacctcctggctttgaaagtggctgtcgtggaccaccaggcatt cctgggctgtgcggcgagcctggcgaacgtggccaacctggaccaaggggaattgatgga ttcccaggggaatgtggtgatccaggtgatcctggattgactggtttggcaggaatccct ggtttccctgggtttgatggtcctaaaggtgaaaaaggtgaatctattggtgagccagga agaacgggtgagagagggtcatgtggagaaaaaggcgcatcagctccccccggtgacaaa ggagactgcggtgaccctggcccacgagggccaaatggaaactgtggtccaccaggccca cctggagacaatggtccttgtggacctcgtggagtggttgggccccccggtccgtgtgga agacatggtccagagggtccagaggggcctccaggtccaccaggccctaaaggaaaccct ggatgccctggccttagaggacctcaagggatgcaagggatccatggactagatggcctg aagggtgacaagggtgagattggatctcgagggctgggtttaataggtgagagaggtaat ccaggaccatgcggagacaagggtgatccaggagacccagggttatgtggccaatcacaa aatggtgttcaaggtccaaatggaccaccaggctgtcgaggggaccctggtccaatgggt cctccaggatttcgtggtgaagaatgtaagattcttaaacctggaccttgtggacaacag ggttactgtgggccagatggacctccagggcccatgggagagataggagagccaggtaat gtcttcacagtgtgtggtgattttggttgcccaggtgatcctggatcaccaggatgtaaa ggagaaaaaggatgcagtgggcccaacggcctgccagggtgtccgggccaagaaggtgca aaaggtgaaagaggacaatgtgggcctatgggccttccgggaccctgtggccccatgggt aattgtggacccccaggatcctgtggtgaaaaaggagagaaaggggacacaggtctaaaa ggacagcctggggatgtaagaactacttatacaccttgtcccactcctcttgggggcctt cctggtgctcgtggtccacctggcccagttggtgaaagtggaaaggatggacctaatggc agtgagggactgaaaggtataaagggatcaaaaggagatgatgggtcccctggacctctt gggccagtaggaccagacggaccattaggatatcgtggagatgaaggtgaaagaggaccg aaaggctctcagggacccccaggaccacgtggtgataaggggcctcctggaatgaatgag aggttttcctcgggtttccttttggtgaagcacagtcagtctgacattgtgcccacttgt cccctgggcctaacgcagttgtggatcggctacagcctgctatatctggagggtcaggag agagcacacacacaagacctgggccaggcaggttcatgtataccgatgttcagcaccatg ccgttctcctgctgtaatatgaactcctgtgattatgccagccgcaatgacaaatcctat tggctgtctacaaccgcctcaattccaatgatgcctatgaaaggaatggaaattcagcca cacatcagcaggtgtgtggtgtgtgaggctgcatcgccaaccattgctatacacagtcaa gacaggtctacaccatcgtgtccacccaattggacaagcctctggaccggatattcattc attatgtatacaggagcaggggacgagggaggcggacagtctctgacatcaacaggaagc tgcttgcaggacttccgcagtctgccgttcgtggagtgccaaggttcgcttggcacatgc aagtattttgccactatctacagtttctggctgactagagtggacacacagggctttaac tccaatcctcacagtactgtgcttcagaccgaaagggagaagcgcgagagcgtcagcaaa tgcagcgtctgcatgatgaatgatcccaacaaatga

DBGET integrated database retrieval system