Ctenopharyngodon idella (grass carp): 127495572
Help
Entry
127495572 CDS
T08802
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127495572
Membrane trafficking [BR:
cide04131
]
Protein recycling
Others
EARP complex
127495572
Endosome - Golgi transport
Tethering complex
GARP complex
127495572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Laminin_II
GrpE
Sec8_N
COG3_N
NBD94
FKBP15
Med11
Seryl_tRNA_N
ING
Motif
Other DBs
NCBI-GeneID:
127495572
NCBI-ProteinID:
XP_051718457
LinkDB
All DBs
Position
15:complement(28288857..28313966)
Genome browser
AA seq
831 aa
AA seq
DB search
MMEDEELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNNIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEETFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRTRAREIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLNDGPGQKKPETPLEPTNPFLEDESGEDNISEKDEDLDRPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALSTIFQKYLREYAWKILSGNLPKTSTNSGGLTISSLLKEKEGEVA
KFTMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLSGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKY
FTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTILLDLPSIGSQVVRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRSE
QSTMLELFRQRLPTPPSGPDGGPSLSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatgaagaattagagtttgtggaagatttggaggcgattttacaccttact
ccagaagtgcagctggccattgagcaggttttccccagccaagaccctttggatcgtgct
gacttcaatgctgttgaatacattaataccttgtttccaacagagcagtctttggcgaac
atagacgacgtggtgaataacatacggcttaaaatcagacggttggatgacaacatcagg
acagtggtgaggggacagactaatgtggggcaagatggcagacaggcattggaggaggcc
cagaaagccatccagcaactctttggcaaaatcaaagacatcaaagacaaagcggagaaa
tcggagcaaatggttaaagagatcacacgggacatcaagcagttggaccatgcaaagcgt
cacctgacgacttccataacaaccctcaatcacctgcacatgctggctggcggtgtggac
tctcttgaagctatgactcgaaagaggcagtatggggaggtggccaatcttcttcagggt
gtagtcaacgtgcttgagcacttccagaagtacatgggcatcccccagatacgccagctc
tcagagagagttaaagctgcacagagcgagcttggtacacagatactggctgacttcgag
gagacttttcctgctcagggttcaaagaaatctggaggtcctagcattgttctcagagat
gcctgcttggtagcgaatgtcctagatcctcggattaagcaggagatcatcaaaaagttc
atcaggcagcacctgtcagaatatttagttctcttccaagagaaccaggatgtggcgtgg
cttgacaaaatagaccggcgctatgcgtggatcaagcgtcagctcgtggactatgaagag
aaatatggacgaatgttccctgaggagtggtgcatgaccgagcgcatcgctgtagagttc
tgtcatatcaccagaaccgagctagccaagctgatgcgaacccgtgccagggagatcgag
gtcaagcttttgctctttgctattcagaggaccaccaatttcgagggactgctggctaag
cgcttctcgggctgcaccttgaacgatggacccgggcagaaaaaacctgagacgcctcta
gaaccaacaaacccctttctagaagacgagtcaggagaggacaacatatcagaaaaggat
gaagatttggatagaccaaagaagcccaaggctccagacaaccccttccatggcattgtg
tccaagtgctttgagcctcatctctacgtttacatcgagtcgcaggataaaaatcttgga
gagctgatcgaccgttttgttgctgatttccgggcacagggtccccctaaatcaggtaca
gatgagggaggcgctgtgctccccagctgtgcagatctcttcgtgtactacaagaagtgt
atggtgcaatgctcgcaactgagcactggggaacccatgattgcactgtccaccatcttc
cagaaatatctgcgcgagtatgcctggaagatcctctctggaaacctacccaagaccagc
accaatagtggtggtctgaccatcagcagtctactgaaggagaaagagggagaagtggcc
aagttcacaatggaagagctgtgtctcatttgcagcatcctaagcactgctgaatactgc
ctggctaccacacagcagctggaggagaagcttaaggaaaaggtggacaagtccctaatg
gagagaataaacttaagtggggagatggacacctttagcacggttatctcaaacagtatc
cagctcttggttcaggacctggacgctgcatgtgatccagccctcacagctatgagcaag
atgccgtggcagagtgtggaacatgtgggagaccaaagcccgtatgtgacctctgtaatc
atgcacatcaaacagaatgtgcccatcattagagacaacctggcctccacccggaaatac
ttcacccagttctgcattaagtttaccaactccttcattccaaagttcatcaaccacctg
ttcaggtgtaagccaatcagcatggttggagcagagcaactactcctggacacacactcc
ctcaagaccattcttctagacctcccttccattggctctcaggtggtccgtaaagcccct
gccagctacaccaaaatagtggttaaaggaatgactcgagcggagatgatcctcaaggtg
gtcatggcccctcatgagccgtccgtggtctttgtggacaactacatcaagctccttgct
gacagcaaccctgagactttccagaagatactagatatgaagggtctgaaacggagtgag
cagagcaccatgctggagcttttcagacagaggttgcctactccgccatcaggaccagac
ggtggcccatcattgtcctttagtgctcccacccctgaacaagaatcttcccgaatccgc
aaactggaaaagctcattaaaaagagaattcagtaa
DBGET
integrated database retrieval system
