Ctenopharyngodon idella (grass carp): 127495774
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Entry
127495774 CDS
T08802
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127495774
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127495774
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
127495774
NCBI-ProteinID:
XP_051718994
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All DBs
Position
15:94173..108158
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AA seq
538 aa
AA seq
DB search
MDGIASDVAVGVKRSSDELLSGSLYNSPNSSVTANGGDSKKLRVEDSMDSPPSRVIHIRK
LPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVP
VFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDTAGESVLTPAPSPVLRIIID
NMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNS
CCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPPVDPSVAAALSKDSTSLLGTPS
GMVTSYSSGGGFPSSLGAISPLSAAAAAAAAAGRVALSGHSGPGGVLLVSNLNDEMVTPQ
SLFTLFGVYGDVQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTLSKHQ
TVQLPREGLDDQGLTKDFTSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPENVTEEDLRL
LFSNSGGTVKAFKFFQDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgcaagtgatgttgcagttggtgtgaagagaagctcagatgaattgctg
tctggcagtctgtacaacagtccaaactcatcagtcactgctaatggaggtgacagtaaa
aaactgagggtggaggacagcatggatagcccaccgtctagagtcattcatattcggaaa
ctccccaatgaggtttccgagactgaggtcatcgcactgggcttgccctttggaaaggtc
actaatatcctgatgcttaaaggcaaaaatcaggcatttttggagctgggaacagaggaa
gcagctgttaccatggtgaactactacacagctgttacacctcaagtgcgtaatgtccca
gtgttcattcagtactccaaccacaaagagctcaagactgacagtgcgctcaaccagcga
gctcaggccgtgctgcaggcggtgtctgcggtccaggagggcggctctccaagctcggac
acggccggtgagagtgtgttaacacctgcccccagcccagtactgcgaataatcatcgac
aacatgttctacccagtcaccctggacgtcctccaacagattttctccaagtttgggacc
gtcatgaagataatcacattcaccaaaaataatcagttccaggctcttctgcagttcagt
gacccagtaaatgcccagcaggccaaactgtctttggatggccagaacatatacaactct
tgctgcactttgcgcattgacttctccaagctggtcaacctgaacgtaaaatacaacaac
gacaaaagccgggattatacccggcccgagctgcccgcaggagatggccaaccacccgtg
gacccctctgtggccgccgctctcagcaaagattccacctccctgctcggtactccctct
ggaatggtaacttcctactctagtggtggagggtttccatcttctctaggggccatcagc
cctctgagtgcggcggcggcggcggcggcagctgcagggagggtagcgctgtccggacat
tcgggacctggcggagtgctcttggtcagcaacctcaacgatgagatggttacgccccaa
agtctgtttaccctcttcggtgtctacggtgacgtgcagcgtgtgaagatcctttacaat
aagaaggacagtgctctaatccagatgtccgatgggaaccaagcccagttagccatgagc
catctgaatggacagaagatgtatggcaagatcattcgtgtgacactctctaagcaccag
acagtacagctgcctagggagggtttagatgatcagggcctaaccaaggacttcaccagt
tctccactacatcgcttcaagaagcccgggtctaagaacttccagaacatcttcccccct
tctgctacacttcatctctctaacatacctgagaatgtgacagaggaggatttacgactg
ctcttctctaactccggcggtacagtgaaagcgttcaagtttttccaagatcgcaaaatg
gctctgctgcagatgtccacggtggaggaggcgattcaggcactcattgaccttcacaac
tacgacatgggccgtggtcaccgcctgagagtgtctttctcaaagtctaccatctga
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