Ctenopharyngodon idella (grass carp): 127495902
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Entry
127495902 CDS
T08802
Name
(RefSeq) SR-related and CTD-associated factor 4b
KO
K13167
SR-related and CTD-associated factor 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127495902
03041 Spliceosome [BR:
cide03041
]
127495902
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127495902
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
127495902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
127495902
NCBI-ProteinID:
XP_051719302
LinkDB
All DBs
Position
15:32569102..32601269
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AA seq
836 aa
AA seq
DB search
MDMDAVNAFNGEMMSMMDMTPPISRAKMMSVTKAGIKAIKLYKHVVQIVEKFIKRCKPDL
KVAGLYVVDSIIRQSRHQFGSDKDLFGPRFLKNFTVTFQNLFQCPADDKGKILRVLNLWQ
KNDVFGMDVIQPLLDMATAPVLPVLENGTTVAAPSAMPMPVAVPESVPAPVLVPAVATAT
PAPTVQAPVALAAVAQLLQGTGGVELQQLLQTLQQAGGAGLPQSTAPPTEQKTSLAKSLL
DRFDYDDEPEPVEEKTEPAPAAPITINLPPELQQALQAHLLSQIVNQTQMQGQMASQGQV
PSQVQVPSQGQVAPQEFPSMVQTQIPDNPPQNFEESIIQPSTTQQPQDTAETERSVHDGR
DRRHSRRTRSRSPRRRSSSHSRRSRSGSRSRRERSRHHRSRSRERRGRSPQPRSEEKRDR
EKERERRQKGLPPVKKETLSVCSTTLWIGQLDKKTQQQDIMSLMEEFGQIESINMIPPRG
CAYIVMVHRQDAYTALNKLSRGAVKVNQKTIKIAWALNKGIKTDLKKYWDVERGVTYVPW
EKVKPDDILSLQEGGMLDSETLKSEWRSAVAKLAVPVTEGPEGKQEDGAALPSVSQSPSV
QPVSTMNVIPGPLPNMSLPPPAMITGASPPPFPHLGFNPPQMPAGFPPVIPVASMNPAGP
PPSITESPTKEPSEDTPELPKSHMDPTGAQALSPPHLTGILGPRPGPLPPHPPVGLRPPF
MPPFPSNGPHPIHPPPNMPHQMMPPRGPNPMYGEPPAGRFRMPMMGPPRHNGPPRHDGPP
RHDFTPHRPPMGHRGEEPHWRDQAPERGPDRFGNEPPFHRGGWGRGGPRGRSRFGN
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatgcggtgaacgcctttaacggggagatgatgtccatgatggacatgact
cccccgatctcaagagccaaaatgatgtctgtaaccaaagcaggaatcaaagcgatcaag
ctttacaagcacgttgttcaaatcgtggagaagttcatcaagcggtgtaaaccagatcta
aaggttgctggtctctatgtggtcgactcaatcatccgacagtcccgccatcagttcggc
tcagacaaagatctgtttggtccgaggtttttgaaaaacttcactgtaacgtttcagaac
cttttccagtgcccggccgatgacaaggggaagatattgcgtgtgttgaatctgtggcag
aagaatgacgtgtttggcatggacgtcattcagccgctgttagacatggccacggctcca
gtgctgcctgttttagagaatggaaccacagttgccgctccttcagccatgccaatgcca
gtggcagtgccagagtcagtgccagcaccagtgctagtaccagctgttgccacggcaaca
cccgcgcccaccgttcaggccccagtggccctcgctgcagtcgctcagctcctccagggc
acagggggcgtagagttacagcagctgctccaaactcttcagcaggccggaggggcgggg
cttcctcagtctactgccccgcccactgagcagaaaacatcattagctaagtctctgctg
gatcgttttgattatgatgatgaacccgaacctgtggaggaaaagaccgaaccagccccc
gctgctcctattaccataaacctccctccagaattacaacaagccctgcaagcacatctt
ctaagtcaaatcgttaaccagacacagatgcagggtcagatggcgtcccagggtcaagtg
ccgtcccaggttcaagtgccatcccagggtcaggtggcaccccaggagttcccatcgatg
gttcagacccagataccagataatcctcctcaaaactttgaggagagcatcatacagcct
agcacaacccagcagccacaggatacagctgagacagaacgttcagtgcatgatgggaga
gatcgaagacacagcagacgaacaagatcaaggtccccacggagacgatcgtcatcacac
tcacgcagatcgcggtctggttcacgttcccggcgcgaacgctcgaggcatcatcgctcc
cgatccagagagcgtcgaggacgctcaccgcagccacgctcagaggaaaagagagacagg
gagaaagagcgagagcggcgacagaaaggacttccgcccgtcaagaaagaaactctcagc
gtgtgtagtactacattatggatcggacagctggacaaaaagactcaacagcaggacatc
atgagtctgatggaggagttcggacagatcgagtccatcaatatgattcctcccagaggt
tgtgcctacatcgtcatggtgcaccgacaggatgcctacacagccctgaacaaactcagc
agaggggctgttaaagtcaaccagaaaaccattaagatcgcatgggcattgaataagggc
ataaagacggacttgaagaagtactgggacgtggagcggggcgtcacttatgtcccctgg
gaaaaagtgaaacccgatgatattctgagtcttcaagaaggaggcatgcttgactctgaa
acgctcaaatcagagtggagaagtgctgtggctaagctggctgtgccagtaacagaagga
cctgaaggaaaacaggaagatggagctgcactaccatcggtatcacagagcccctcagtt
cagcctgtttccacaatgaatgtcatcccaggaccccttcctaacatgagtttaccacct
ccagccatgatcacaggagcctcccctccgcctttccctcatctgggattcaacccacca
cagatgcctgcaggattccctcctgtcatcccagtggcctctatgaaccctgcaggtcct
cctccatccatcacagaaagcccaaccaaagaaccttcagaagacactcctgagcttccc
aagagtcacatggacccgacaggagctcaagcgctcagtccgccacatctcacggggatt
ctggggcccaggccgggacccctaccaccacacccccctgtggggctccgcccaccattc
atgcctcctttccccagtaatgggcctcatcccattcatccccctccaaatatgccccat
caaatgatgccccccaggggccccaacccaatgtatggtgaacctcctgcgggccgattt
cggatgcccatgatgggccctccaagacacaatggccctccaagacacgatggccctcca
agacacgatttcacccctcacaggccccccatgggtcataggggagaggaaccgcactgg
cgggatcaagcacccgaaaggggcccggacagatttggaaatgagccaccgtttcatcgg
ggtgggtggggcaggggcggccctcgtggacgaagtcgctttgggaactga
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