Ctenopharyngodon idella (grass carp): 127496014
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Entry
127496014 CDS
T08802
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127496014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127496014
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
Nectin family
127496014
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
FAS_meander
Mid2
Adhes-Ig_like
Syndecan
Motif
Other DBs
NCBI-GeneID:
127496014
NCBI-ProteinID:
XP_051719497
LinkDB
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Position
15:complement(23239334..23437976)
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AA seq
420 aa
AA seq
DB search
MAISGLGSHSISLFFCVVLATFLHKGAAQTISVQGQNLVTNNVSVVEGETAIISCRVKNN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELLVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGNPILESREEIVSEGNETEITCTAMGSKPASTIKWMKGDQPLQGE
ATVEELYDRMFTVTSRLRLTVSKEDDGVAVICIIDHPAVKDFQAQKYLEVQYKPEVKIVV
EFPEGLTREGENLELTCKAKGKPQPHQINWLKVDDDFPSHAVITGSDLFIENLNKSYNGT
YRCVASNLVGEAYDDYILYVYDVLTTTPPPTTTTINDFQDSRPDGAPQKIDHAVIGGVVA
VVVFAMLCLLIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNSDDKKEYYI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctcgggactcggatctcactctatttcactctttttctgcgtggttttagca
acatttctgcataaaggagccgctcagaccatatcagtgcagggtcagaacctggtgacg
aataatgtctcagtggtcgagggtgagacggccatcatcagctgccgagtgaaaaacaac
gacgactccgtcatccaactgctcaatcccaaccgacagaccatctacttcagagacgtt
agacccttgaaggacagtcggtttcagctggttaacttctcagacaacgagctgctggtg
tcgttgtccaacgtgtcgctgtcggacgaggggcggtacgtgtgccagctctacacggat
cctcctcaagaagcctatgcagacatcacagtgctggttccaccaggcaacccaatctta
gagtcccgcgaggaaatcgtgagtgaagggaatgagaccgagataacctgcaccgccatg
ggcagcaaacctgcttctaccatcaaatggatgaaaggagaccaaccactgcaaggtgag
gcgactgtcgaggagttatacgacaggatgttcactgtcaccagccggctcaggctcacc
gtctctaaggaggacgatggagtggccgtcatctgcatcattgaccacccagccgtgaag
gacttccaggcccagaaatacctggaagtgcagtataaaccagaagtgaagattgtagtg
gaattcccagagggtttgaccagagaaggagaaaatcttgagctgacatgcaaagctaaa
ggaaaaccgcagcctcatcaaattaactggctcaaagtggatgatgatttcccctcccac
gccgtgattactggctctgatctcttcatcgaaaaccttaacaagtcctacaacggaaca
taccgctgtgtggcatctaacttagtgggagaagcctatgatgattacatcctttatgta
tatgatgttctcaccacaacccccccacccaccactaccaccatcaacgatttccaagat
tcaagaccagatggagcgccacagaaaattgatcacgccgtcattggcggcgttgtcgcg
gtggttgtgttcgccatgctttgtcttctgattgttctcggacgatattttgcgagacac
aaaggtacctactttacccacgaagccaaaggagcggacgatgccgcggacgccgacact
gccatcatcaacgcagagggtggacacaacaattcggatgacaagaaggaatactacatt
taa
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