Ctenopharyngodon idella (grass carp): 127496108
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Entry
127496108 CDS
T08802
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04142
Lysosome
cide04144
Endocytosis
cide05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127496108
04142 Lysosome
127496108
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127496108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127496108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127496108
Membrane trafficking [BR:
cide04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
127496108
Exosome [BR:
cide04147
]
Exosomal proteins
Proteins found in most exosomes
127496108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
127496108
NCBI-ProteinID:
XP_051719700
LinkDB
All DBs
Position
15:complement(24119898..24148622)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFASGSYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPADAWKESQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKAVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQD
DKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLTKVDAIKEKVDKL
DASESLRKEEEQLTEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYPTATGYGQPAQPGF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccttcctatccgcttccaggagcacctgcagctccagaacctgggcata
aacccagcaaatatcgggtttagcaccctcacgatggagtcagataagttcatctgcatt
cgggaaaaggtgggcgaacaggcccaggttgtgatcattgacatgagcgatcccaatacg
cccatccgcaggcccatctctgcagacagtgccatcatgaacccagccagcaaagtcatt
gctcttaaagcggcaaaaacccttcagattttcaacattgaaatgaagagcaagatgaaa
gcccacaccatgaccgaggacgttacattttggaagtggatctctctcaataccgtagca
cttgtgacagacaatgcggtctatcactggagtatggaaggagactcgcaacccatcaaa
gtctttgaccggcattccagtttagcaggctgtcaaattattaactatcgcactgatgcc
aaacaaaaatggctacttctcattggaatttcagcacagcaaaaccgtgttgtgggcgca
atgcaactttactcagtggacagaaaggtgtcgcagccaattgaaggccatgctgctgga
tttgctcagtttaaaatggagggaaatgctgaggaatccacacttttctgctttgctgtt
cggggacaagctggaggaaagttgcacattattgaggttggaacacctccaactggtaat
caaccttttccaaagaaagcagttgatgtatttttccctccagaagcccagaatgatttt
ccagttgccatgcagataagctccaagcatgatgtcgtctttctcatcaccaaatatggc
tacatccacttgtatgaccttgagacgggcacctgcatctacatgaacaggatcagtgga
gagaccatttttgtcaccgcccctcatgaagccacatctggaattattggcgtgaatcgg
aagggacaggtgctgtctgtgtgcgtggaggaagaaaacatcatcccttacatcactaac
gtgctgcagaaccctgacctagctctcaggatggccgtccgcaacaacctggcaggtgca
gaggagctcttcgcccgcaaattcaacaatctgtttgctagtggcagctactctgaagct
gccaaagtggctgccaatgcgccaaagggcatcttgcgcaccccagacaccatccgtcgg
ttccagagtgttcctgcccagcctggtcaaacatctcccctgctgcagtactttgggatt
ctgctggaccagggccagctgaacaagtttgagtcattggagctttgcaggcccgtcctg
cagcaaggccgcaaacagctcctggagaaatggctgaaggaagacaagctggagtgttct
gaagaattgggtgatttggtgaagtctgtggatccaactcttgctcttagtgtttatcta
agagccaacgttcccaacaaagtgatccagtgttttgcagagaccgggcagttccagaaa
attgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgttgaggaac
gtcatgcggatcagtccagaacaaggcctgcagttctcacaaatgctcgttcaagatgag
gaacctctggctgacatcactcagatcgtggatgtgtttatggagtataacctgatccag
cagtgcacttctttcctgttggatgccctgaagaacaaccgccccaccgagggtcccttg
cagactcgtctgctggagatgaacttgatgcatgccccacaggtggcagatgcaatcctt
gggaaccagatgttcactcactatgaccgggcccatgtggctcagctgtgtgagaaggcg
ggtctactgcagagagctctggagcactacactgacctgtatgacatcaaacgggccgtg
gtccacacccacctgctcaacccagagtggctggtgaacttctttggctctctatctgtg
gaagactcactggagtgtctgagagccatgctgtctgccaacatcaggcagaacctccag
atctgcgtccaggtggcctccaagtaccacgagcagctttccactcagtcgctcacagag
ctctttgagtccttcaagagctttgagggtctgttctacttcctgggctctattgtgaac
ttcagccaggatccagaggttcacttcaaatacatccaggctgcctgtaaaactggtcaa
atcaaagaagtggagagaatctgtagagagagcaactgttacgatcctgagcgtgtgaag
aacttcctgaaggaagcaaaactgaccgaccagctgcctctcatcattgtatgtgaccgc
tttgactttgtccacgacctcgtgctctacttataccgcaacaacctgcagaagtacatt
gagatctacgttcagaaggtcaaccccagccgtttacctgtggtgattggagggctgctg
gatgtggactgctctgaggacgtcattaagaacctcattctggtggtcagagggcagttc
tccactgatgagcttgtggccgaggtggagaaaagaaacagactgaagctgcttctgccg
tggttggaggcccgcatccacgagggctgtgaggaacctgctacacataatgccctggct
aagatctacatcgacagcaacaacaaccctgagcgcttcctcagagagaacccctactat
gacagtcgtgtagtgggcaagtactgcgagaagagggacccccatctggcctgtgtggct
tatgagagagggcagtgtgaccaagagctcatccatgtttgcaatgagaactcactcttc
aagagtctgtcacgataccttgtgcgtcgtaaggaccccgagctatgggctagtgtgctt
ctggaaagcaacccttacaggagacccctaatcgatcaggttgtgcaaactgccctctct
gagacccaggaccctgaagaagtctctgttactgtcaaagctttcatgactgctgaccta
cccaatgaactcattgagctcctggagaagatcgtcctggacaactccgttttcagcgaa
catcggaacctgcagaacctcctgatcctgacagccatcaaagctgaccgcacacgcgtc
atggagtacatcaaccgcctcgacaactacgacgccccagacattgctaacattgccatt
agcaatgagctcttcgaggaggcttttgcgatcttcaggaagttcgatgtgaacacatca
gcagtgcaggttcttatcgagcacattgggaatctggaccgggcctatgagtttgctgag
cgctgtaatgagccggccgtgtggagtcagctggctaaagcacagctgcaaaaggggctg
gtgaaagaggccattgactcttacatcaaagctgacgatccctcagcctacatggaagtg
ggacaagctgcagcccaaagtggaaactgggaggatcttgtcaagtttctgcagatggct
cgtaagaaggcccgtgaatcgtatgtagagactgagctgatctttgccttggccaagact
aaccgtctagctgaactggaggagtttatcaatgggccaaacaacgcacacattcaacaa
gttggtgaccgatgctatgacgagaagatgtacgaggcagctaaactactttataacaat
gtatccaacttcggccgtctggcctccactctggtgcatctcggggagtatcaggctgct
gtcgatggggcccgcaaagccaacagcacaaggacctggaaagaggtttgctttgcctgc
gttgatgggaaggagtttcgtctggctcagatgtgtggattacatattgtcgttcatgct
gatgaacttgaggagctcatcaactactaccaggaccgtggctatttcgaggagctaatc
accatgctggaggcggcgctagggttggagcgcgctcacatgggcatgttcacagaactg
gccatcctctactccaaattcaaaccacagaagatgagggagcacctggagctcttctgg
tccagagtgaacattcccaaggttttgagggcagctgagcaggctcacctgtggggagag
ctagtcttcctgtatgataaatatgaggagtatgacaatgctatcatcaccatgatgaac
catcctgcagatgcctggaaggagagtcaatttaaggacatcataaccaaggtggctaac
gttgaactgtattacaaagccgtccagttctacctggagtttaaaccgctgttactgaac
gacctgttgatcgtactgtccccacgtcttgaccatactcgtgccgtcaacttcttcagc
aaggtcaagcagttgccgttggtgaaaccttacctgagatctgtacagaaccacaacaac
aaggctgtaaatgaagcactaaataatctcttcatcacagaggaggattatcaggctctg
cgcacatccattgatgcctacgacaacttcgacaacatatctctggctcagagcctggag
aagcatgaactcatcgagttcaggcgaatcgccgcctacctgttcaaaggcaacaaccgc
tggaagcagagtgtggagctctgcaagaaagacaaactctacaaggacgcaatgcagtac
gcttcagagtcaaaggatacagagctggctgaggagctgctgcagtggttcttgcaggat
gacaagaaagagtgttttgccgcctgcctgtttacctgttacgacctgctgaggcccgac
gtggtgctggagaccgcgtggaggcacaacctcatggacttctccatgccctacttcatc
caggtcatgagggagtacctcaccaaggttgatgcaattaaggaaaaggttgataagttg
gatgcttctgagtctttgaggaaagaggaagaacagctcacagaggcacaacccattgtc
tatggcacaccccagctgatgctgaccgcaggccccaatgtcgcagtacccccacagcag
ccttacggctacggataccccacagcgaccggctacggacaacccgcacagccaggcttc
ggctatggcatgtaa
DBGET
integrated database retrieval system
