Ctenopharyngodon idella (grass carp): 127496146
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Entry
127496146 CDS
T08802
Name
(RefSeq) transcription factor RelB isoform X1
KO
K09253
transcription factor RelB
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127496146
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127496146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127496146
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127496146
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
127496146
NCBI-ProteinID:
XP_051719777
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Position
15:complement(24225811..24235532)
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AA seq
607 aa
AA seq
DB search
MKDMSIQNGTAENGALDLDLINEYLLEKTTKGPSQPTLPGPPPPPPEDQDIQPVDPPSRS
RRTAPVLVSRGAAPHTNLSAVKLKSTTYSFDQTPNAQTDGMASMHPMRGHKGSSQRRGQA
SLVPQCLHPQQSGTEHLERFLEKPELVVVEQPKERGMRFRYECEGRSAGSILGASSTDSS
KTLPAIEIQGPIDNIKKVMVTVSLVTKDIPYRPHPHCLVGKDCSDGICVIHINPHSTRQH
SFANLGIQCVRRKELDASLQKRRNKKIDPFNTGHSKSIEDMDMNVVRLCFQCELERKDGD
RIPLAPVVSNPIYDKKATTTAELKINRLNVVRGPCTGKTEIYMLCDKVQKDDIEIIFSTE
DWEGKAEFAQTDVHRQIAIVFKSPPFREQNISEEVEVNVCLRRMSDRMDSEPVKFTYVPD
NADPYGVNRKRKIKSDVAFSEPCSVPQSQDIIVNEPSMPQHFDPFYTLPDCNLPNASMPI
TVPDGGIHMQSQGMEEIHYNEDFKQEDGCVSMDPETLETFIQGISQCLIQPGSEQILNQI
LLNPDFNFSFEGTDTNSNVNQTMINMASINDAHFSQMVNENQAYPADLENIEGLIFAPVK
SENDLDH
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacatgagcattcaaaacggcacagcggaaaatggagccttggatctagacctt
ataaatgagtaccttttggagaaaacaaccaaagggccaagtcagccgacgctccctggt
cctcctcctcctccacctgaagaccaagacatccagccagttgatccaccatctagaagc
aggagaactgctccagtgttggtctccagaggagcagcgccacacacgaatctttctgct
gtcaaactaaaatcaacaacatacagctttgaccagactccaaacgcgcagactgatggt
atggcatcaatgcatcccatgcgaggccacaaagggtcatctcagcgacgtggacaggca
tcattagtgccccagtgtcttcatcctcagcagtctggaacagaacatctggagcgcttc
ctggaaaagccagagctggtggttgtggagcagccaaaggagcgtggcatgcgatttcgc
tatgagtgtgaaggacgatcggcgggcagcatccttggagcctccagcactgactccagc
aaaaccctgcctgctattgaaattcaaggccccattgataatatcaagaaagtgatggtc
accgtgtctcttgtgacaaaggacatcccgtaccgcccacacccacactgcttggttggg
aaagactgttcagatggcatctgtgtcatccacatcaatccccacagtactcgtcaacac
agctttgccaatctgggcatccagtgtgtgcggagaaaggaacttgatgcctcactgcag
aagaggaggaataagaaaattgatccttttaacacgggccactctaagagcattgaggac
atggatatgaacgtggtgagattgtgtttccagtgtgagctggaacgaaaggacggagac
aggatcccccttgcccctgtggtttccaaccccatctacgacaagaaggcgaccacaaca
gcagagctgaaaatcaatcgccttaatgtggtcagaggcccctgcacaggcaaaactgaa
atttacatgctctgtgacaaagtgcagaaagatgacattgagataatcttcagcacggag
gactgggagggcaaggctgagtttgctcagactgatgtccacagacaaatcgccattgtc
ttcaagtctccaccattcagggagcagaatatatctgaagaggtggaggtcaacgtgtgt
ctacgccgcatgtctgaccggatggacagcgagcctgtcaagttcacctatgttccagac
aacgcagatccctacggagtgaaccgcaagaggaaaataaaatctgacgtggcgttcagc
gagccgtgcagcgttcctcaaagtcaagacatcatcgtgaacgagcccagcatgccacag
cattttgacccattctacactcttcccgattgtaaccttcccaatgcttccatgccaatc
actgttccggacggaggcatccacatgcaatcccagggcatggaggaaattcattataat
gaagactttaaacaagaggacggttgtgttagcatggacccagagactttggaaaccttc
atccaaggcatttcccagtgcttgattcagccaggttcagagcagattttaaatcagatc
cttttaaatcctgatttcaacttcagttttgaaggcacagatacaaactcaaatgtcaac
caaactatgataaacatggcgtctataaatgacgcacacttcagtcagatggtgaatgag
aatcaggcctatccagcagatctagagaacattgaaggcctcattttcgcccctgtgaag
agcgagaatgacctagaccactga
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