Ctenopharyngodon idella (grass carp): 127496154
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Entry
127496154 CDS
T08802
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127496154
Transcription factors [BR:
cide03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127496154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
127496154
NCBI-ProteinID:
XP_051719791
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All DBs
Position
15:complement(18658216..18709810)
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AA seq
769 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLLEGENNCNKVRRTSHSLV
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQMSHESASSSASASSLAGTPEPAPSSPCSPVSELSERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRPLHRPMGLVALAHTLPPSTL
NEVRMESNMFVFRVNMDLQITYCENRISEYMDLSPAEVVGQTCYHFIHAEDLDTVRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRPELPDMPL
DLLQLPESLRAERLQASSSPRDTSPKAQGSTATQPLKGRSETDHKGKEPFSHTAASQSEG
TRKRSHQSDAESGPHEARRRIEVFRQRDDSPCTSSDQASDSEVEEDDERESVWDHNPTSK
RVKSEEGALKQGNGANGAGKIHNGRAVIQHLKSVVTSSGSNIKTEQEVIGTVGVGSGRRW
SQPQPGSVGTNGSSPPSQPPNSTPTEAPPKGLFNPPSPTLSPPISASSLPRDDRSIHGGR
APDFELLQRLTASGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPEMPTAHSDGHRSDHV
AKTPTFFPHLQRIASLPPFSGFSPAEPTFPPTLPFCMNGLRGAAGTDED
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgaggggaagtgtgtgagtgtggagtgggacttctta
caggggctccttgccaaaccacccaccttaccttgcttgcagaacttgaggaaggagaag
tcgcgcaatgcagctcgttctcggcggggtaaagagaactttgagttcttcgagctggcg
aagatgcttcccctccccggggcaattaccagccagctggacaaggcctccatcatccgc
ctcaccatcagttacctgcatatgagacactttgccagccagggagacccaccctggagc
cctctactggagggagagaacaactgcaacaaggtgcgaagaacaagtcattcgttggtc
actgacatatttgaacagcacctgggagctcatctgctgcagtctctggatggattcgtg
ttcgtggtcagtcaagaaggcagatttctgtatatctcagagactgtgtccatctacctt
ggcctttcacaggttgagttgactggcagtagcgtgttcgattacatccaccctgcggat
catgttgagatggcagagcgtcttggcattcggccacacctccgggcggaggcaggctgt
caaatgtcccatgagagtgcttcaagctccgcctctgcatcctcactggctggcacccct
gaaccagcaccatccagcccctgttctccagtcagtgagttgtcagaacgtggcttcttc
atccggatgaaatccaccctcaccaagcgtggcctccacgttaaatcctctggctataaa
gtgattcatgtgacaggtcggatacggtgtcggccagccctggtgccaggctcctcccgc
cccttgcatcggccaatgggattggttgctctggctcacacgcttccgccctccacactc
aatgaggtgcgcatggaaagtaacatgtttgtcttccgcgtcaacatggacctgcagatc
acctactgtgaaaacaggatttcggagtatatggacctgagcccagctgaggtggttgga
caaacctgctaccattttatccatgcagaagacctggacaccgtcaggcagagccatgaa
gacttgctgcggaaagggcaggttgtgacggggtattataggtggctgcagaggagagga
gggtatctgtggattcagtcctgtgccaccgtgtccattaaccacaaagcgccccatgag
cgtaacgtcatctgggtcaactatgtgctcagtcgaccagagctgccagacatgcctctg
gacttattacaactcccagaaagcctgagggcagagcggcttcaagcaagctcctcccca
cgtgacacctctccaaaggcacaaggctccacggcgacacagccattgaaaggcaggtct
gagacggaccacaaagggaaggaacccttttcacacactgctgccagccaatcagagggc
accaggaagagatcgcaccagtctgacgctgaaagtggccctcacgaggcgaggaggcgg
attgaggtgttccgtcagagagatgacagcccatgtacctcctcggaccaagccagcgac
agcgaggtggaagaggacgatgagagagagagcgtgtgggaccacaaccccaccagcaaa
cgggtgaagagcgaagagggggcactgaaacaaggcaatggggccaatggagcaggtaag
atccacaacggccgcgctgtgatccagcatcttaagagcgtggtgaccagttccgggtcg
aatattaagactgaacaagaagtgataggaactgtaggtgtaggttctgggaggcgctgg
agccaacctcagcccggcagtgtaggaaccaatggcagcagtccaccttcccaacctcca
aactccaccccgacagaagctccacccaagggtctgttcaacccaccatccccaactctg
tctccacccatctcagcctcgtccctgcccagagatgacaggtccatccacggagggcgc
gctccagacttcgagctactgcagagactgactgcgagtggggctgcgggacgtgtgctc
tttcaccccctggctcttggcccacaggggcctcagagtctttacgctcccagcaccatt
cgctacgccccacctgagatgcctacagctcactctgatgggcaccgttcagaccacgtg
gccaaaacccccactttctttcctcacctgcaaaggatcgcatctctgcctccttttagt
ggcttttctccagccgaacccacctttcctccaactctgcccttctgtatgaacggactg
aggggggcggcagggacagacgaggattga
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