Ctenopharyngodon idella (grass carp): 127496256
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Entry
127496256 CDS
T08802
Name
(RefSeq) cell adhesion molecule DSCAM isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127496256
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
DSCAM family
127496256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Interfer-bind
fn3_2
DUF6377
DUF6249
DUF4446
Motif
Other DBs
NCBI-GeneID:
127496256
NCBI-ProteinID:
XP_051720006
LinkDB
All DBs
Position
15:complement(12008524..12212080)
Genome browser
AA seq
2020 aa
AA seq
DB search
MWILAFLFLQSILNVFGEDLRSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPATLRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTAVFKCIIPASVEEYVSVVSWEKDTVSLVSGSRYLITSTGA
LYILDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSEPVDSAPVILDGFERREVMVGH
RVELPCKASGHPPPRYRWLRDNSPLESDSRYHQSVSGLLIEATRPSDAGSYVCEVWNSFG
NAKVVGRLVVKQPLKAVVSPRKVRGSVGSQVSLFCSVTGSDEYDITWYRNGEKIYQGINV
RITGINNENLVMEGMAKSDGGAYQCFARNGKMSTQDLVQVVLEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPTVTWTLDDDPVIKDSNHRMDRIITTEGHVLSYLNVSHTQVSDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNVTAIAGRDTYIHCRIIGYPYYSIKWYKD
SKLLPFNHRQRAFENNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVISGDLPMSITWHKDGRPINASLGVTIDNIDFTSSLRISNLSE
IHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPRDQDGIYGKSVILNCSAKGNPIPTI
VWNHSKGAGVPQFQPIALNSGSRIQLLEKGSLLIKHVLEEDAGFYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDMSRYVVTV
KEVADEVISTLQILHTVREDSGFFSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDINYKNKSASWASSQMTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEAPPDGAPQDVQLEAISSQSIKVTWKPPLKHLQNGLIRS
YQVCYREFGTGGSPQYNTINVDTTGDIETLTLDNLKKYTQYEVRVQAANRAGMGPTSEEI
TITTLEDVPSRPPENVVTTATTPETISLSWSALPKEALNGMLLGYRVIYWANLPDGELGE
IRNITTTKPSLELERLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
STSSVVFVSWLPPFKLNGIIRKYTVFCSNPYPTVISEFEAAPDVYFRRLTNLNQNWQYSI
WVVAVTAAGRGNASEIITVEPQAKAPARILTFSGTVTTPWMRDIVLPCKAVGDPPPTIKW
LKGNNGTPAPVSIDGRRSAHSNGSFVIRTVKAEDSGYYRCVASNNWGSDEIMLNLQVQVP
PDQPRLTVTKTTTTSITLFWIPGDNGGSSIRGYILQYSEDNSEEWGSFSISPSERSYRLE
NLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSSINSTRVELNLIGW
NNGGCPIDSFTLEYRPVDTMKWTMVKRDSLTKSYTLYDLQEATWYELQMRVGNSAGTAEK
RVLFATLNVDGSTIAPLPKTVDPSQENRQGNEGLKMMVTIICILVAISMVFIVLLVLRRR
RREQRLKRLRDAKSLAEMLMSKNARTPDTVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHPPVSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSLT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGAAPS
GREATGQTCMDPQKSRLAKRPALLAPTPSETPSSALSSSGPPSREAVQQWQPGTASTLPQ
REPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcatttctctttctccagagcatcctgaatgttttcggtgaagatcta
cgttccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcaccaca
ggggcactggtgccgtgtcctgccgcggccgtgccccccgccacgctgcgctggtacctc
gccaccggggaggagatctacgatgtcccaggcatccgccatgtgcaccccaacggcacg
ctgcagatctacggcttcctgccgtccagctttagtaacctaatcaatgacaatacgtac
tactgcacagcggaaaacccatcaggaaagatcaggagccaagatctacacattaaggcc
gtattccgggagccgtacacagtgcgtgtggccgatcagagagtcatgcgagggaatacg
gccgtcttcaagtgcattatcccggcctcagtagaggagtacgtcagtgttgtatcatgg
gagaaagacacagtctcacttgtctcaggatcaagatatcttattacatccacgggggcc
ttgtatattctggatgtgcagtcagaggacgcggtgaatatttatcgctgtaccacgcgg
caccgatacacaggggagaccagacagagcaacagtgcccgactgcttttatcagaacct
gtggactccgctccggtgattctggatgggtttgaacggagggaggttatggtgggacac
cgggtggagctcccgtgtaaagcgtccggtcaccccccacccaggtatcgttggctgagg
gacaacagccccttagaatcagacagccgctaccaccagagtgtatcgggccttctcatc
gaggccacacgacccagtgacgcaggcagttatgtgtgtgaggtgtggaacagcttcggg
aacgccaaagtggtcggacggctggtggtcaaacagcctctgaaagcagtggtgagccca
cggaaggtgagaggcagcgtgggtagccaagtgtctctgttctgcagtgtgactggttct
gacgagtatgacatcacctggtacaggaacggtgagaagatctatcagggtataaacgta
cgtatcacgggcatcaacaacgagaacctggtgatggagggaatggccaagagtgatgga
ggagcgtatcagtgctttgctcgaaatggcaagatgtccacccaagacttagttcaggtc
gtcttggaagacgggacgccaaagatcctctctgccttcagcgagaaggtggtgagcccg
aatgagcccatctcccttgtgtgtcacgtgaaaggaacgcccctccccaccgtcacctgg
accctggacgacgaccccgtcatcaaagacagcaaccaccgcatggatcgcatcatcacc
acggaaggccacgtgctcagctacctgaatgtgtctcacacacaggtcagcgatgggggc
gtctaccgctgcacctgcaacaactcggccggatcggtctcctaccaggctcgaataaac
gtaagaggccctgccagtattcgaccaatgaaaaatgtcactgccatcgctgggagggac
acgtacattcactgtcgcatcattggttacccttactactctattaagtggtacaaggat
tccaaactgctcccgttcaaccatcgccaacgtgcctttgagaacaacggcacactgaag
ctgtccaatgtgcaaaactcggacgagggagagtacacatgctacgtgttggtggatcca
gagaaacaaattcacaggagtgttcatgtgacagtgaaagtgccccctctgatccaacac
tccgactctcagagcgcttccatcggtcagcgtgtcttcatcccctgtgtggtcatatcc
ggcgacctgcccatgtctataacctggcacaaagatggacgaccaattaatgccagcctg
ggtgtcaccatcgacaatatagactttaccagctcattacgcatttcaaacctgtcggaa
attcataacggcagttacacctgcattgcccgtaacgaggctgcagccgtcgagcacagt
atacagctcatcgttaaagttccaccacattttgaggtacagccaagagaccaggacggc
atatatgggaaatcggtgatcctgaattgttcagcaaagggaaacccaatccccactata
gtatggaaccactccaaaggtgctggcgtacctcagttccagcccatcgccttgaattct
ggctcacgtatccagctcctggaaaagggctctctgctcataaaacacgtcctggaggaa
gatgctggattttatctgtgcaaggtcagcaatgacgtgggagccgatatcagcaagagc
atgtacctcaccgttaaaattcccgctatgatcacatcttaccccaacaccacacgagcg
gaacagggtcacatgactgagatgagctgcactgctcacggtgaaaagcccatcaaggtt
cgctgggagaaggaatctcatatcatcaacccagacatgagccgctatgtggttactgtg
aaggaagtggccgatgaggtcatatccaccctgcagatcttacatactgtcagagaagat
tctggctttttctcctgcattgctattaactcttatggtgaagataaaggaatcattcag
ctgatagtacaagatcgtcctgatcctcctgaggttgagatcagagaggtcaaggaccga
accatcgcacttcgctggacaatgggctttgatggcaacagccctattacaggatatgac
atcaactataaaaacaaatctgcttcatgggcctcatctcagatgaccaaagacgtctcc
cctcagctgaatcaggccaccatcattgaactccaccctgcttccacctacaacatccgc
atgtttgccaaaaaccagatcggagaaagccgaccaagcaatgagctgaccatcaccaca
gatgaagccccacctgatggcgctcctcaagacgtgcagctggaagcaatctcatcccaa
agcatcaaagtcacgtggaagccccccctcaaacatttgcagaatggtttgatccgaagc
taccaagtgtgttatcgggagtttgggacagggggcagcccccagtacaacaccatcaat
gttgacaccacgggggacatcgaaaccctcactctggataacctgaagaagtacacacag
tatgaggtgcgggtgcaagcggccaatcgggcaggaatgggtcccacctcagaggaaatc
accatcaccacgctagaggatgtgcccagtcgcccaccggagaacgttgtgaccacagcc
accacccccgagaccatctccctgtcctggtctgctctgcccaaagaagccctgaacggc
atgctccttggatatcgtgtcatctactgggccaatctacctgatggagagctgggagag
atcaggaacatcacaaccaccaagccttcactagagttggaacggctggagaaatacacc
aactacagtatccaggttctggccttcactcgagccggagatggagtccgtagcgagcag
atatacacgcgcaccaaagaggacgttcctggccctccggctggagttaaggcagctgct
tccacaagctcggtggtgtttgtttcctggctgcctccattcaagctcaacggaatcatc
cggaaatacaccgtcttctgttctaacccttaccccacggtgatcagtgagttcgaggct
gctcctgatgtttacttccgtcgtttgaccaacctgaaccagaactggcagtacagcatc
tgggtggttgcggtcactgcggcaggtcgtgggaatgccagtgaaattatcaccgtagag
ccccaagctaaagcccctgctcgaatcctgacgttcagtggcactgtgactaccccttgg
atgagggacattgtccttccatgcaaagcagtcggagaccctcctccaaccatcaagtgg
ctgaagggaaataatggtacacctgctccagtttcaatcgatggtcgtcgcagcgctcac
agcaatggcagctttgttattcgtacagtcaaagcagaggattctgggtactacagatgt
gttgccagcaataactggggttcagatgagatcatgctaaatcttcaggtccaagtacct
ccggaccaaccacgcctcacagtgaccaaaaccacaaccacctccatcacactgttctgg
atccctggagacaatggaggaagctccatcagaggctacattctgcagtactctgaggat
aacagtgaagagtggggcagtttctccatcagccccagtgagcggtcttaccgtctggag
aatctgaagtgcggtacttggtacaaatttactctgactgcacaaaatgcagttggtcct
ggacgcatcagtgaaatcattgaggctaaaacccatgggaaagaaccacagttcgccaaa
gaccatgagcttttctcaagtatcaactctacccgtgtggagctcaacctcattggctgg
aacaacggcggctgtccgatcgactccttcacactggaatatcggcccgtggacactatg
aaatggaccatggtaaagcgagattccctcaccaagagctacactctgtacgacctacag
gaggccacctggtatgagctccagatgagagtgggcaacagtgcaggaacagcagagaag
agggtgctgtttgccactttaaacgtggatggcagcacaattgctccattgccaaagact
gtggaccccagccaagagaacaggcagggcaatgaaggactaaagatgatggtcacaatc
atatgcattctggtggcaatctccatggtcttcattgttcttctggtattgaggaggagg
agaagagagcagagactcaagagattacgagatgcaaagagcctagcagagatgctaatg
agtaaaaatgcacgtacaccagacaccgtgaacaaacagcagcagactctgaggatgcac
atcgatatcccacgtgctcagctgctcattgaggagagagacactatggagacaatcgat
gaccgctccacagtgctattgacggataatgactttggagaaacgtctaaacagaagtcc
tctaccgtcacccatacagtgcattaccagtctctatctcaggccactggaccactagta
gacgtgtctgacgctagacctggtacaaaccccactgcccgccgcacagctaaagcaggt
cctgccacacgcagtcgctacgccagccagtggaccctgaaccgaccgcaccctcccgtc
tcctcacacactctgactactgactggagactgcccacaccccgcgccacgggctcagtg
gacaaagagagcgacagctacagtgtcagtccctctcaggacacagaccgtgctcgcagc
agtatggtgtctacagaaagcgcctcctccacgtatgaggagttagcccgtgcctacgaa
cacgccaagatggaggaacagctgcgacacgctaagttcacgatcacagagtgcttcatc
tcagacacatcctccgaacagatgacggccggcaccaatgactacacagacagcctgacg
tccagcacgccatcagagtcaggcatctgcagatttaccgcctccccgcccaaaccacaa
gacgccagccgggtcatgaatatggccgtgcccaaagcacacagacccggaggtgagctg
gtccatcttcccccttacctacgcatggacttccttttgaaccggggggcggccccttca
ggtcgcgaggccacaggacagacttgtatggacccacagaagagccgattggcgaagcgg
ccagcattgctggcccccacaccctccgagaccccctcgtcagccctctcttcctccggc
ccccccagcagagaggcagtacagcagtggcagccgggaactgcctcgacactgccacag
cgcgagccgggcgacctggcccaggccgccaaactcagcagctcccaggaatcgctgcta
gactccagaggacacctgaaacaaagcaacaacccctacgcaaagtcctacacacttgta
taa
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