Ctenopharyngodon idella (grass carp): 127496299
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Entry
127496299 CDS
T08802
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127496299
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127496299
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
127496299
NCBI-ProteinID:
XP_051720136
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Position
15:complement(4200672..4210227)
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AA seq
523 aa
AA seq
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MPALCLVYWIAPKSKLGKLLKVPVIKFLLHSASYMWFLITLLAESIFMEIYRSDFASRKQ
NILHNSLHMIWVAGFFWFECKEVWLEGLKSYFLDLWNILDMMVLSMYLASFTLRILIMLK
GYFLCQDTSTQELCDYFTNTVREDWKQEDPQLIAETLFAVTSMLSFTRLAYILPAHESLG
TLQISMGRMIDDMMRFMFILMIIGTAFLCGINNIYVPYVVSPHLGRFNETFNFLFWTMFG
MANQEYVDMPDYALAEFVGRIFYGIFTLLIVIVLLNMLIAMISNSFQRIEDDADVEWKFA
RSKLYLSYFREGLTMPVPFNIIPSPKALFYVLRSIFQKICCCCNKKAPEYPPITSVSSNT
LNSSGGQGEGRVPYRLQVTKALVHRYIEAARREFEESKRKDVGNRITELNKVVGRLHTEM
KDFHQKLQWRRKSEPDQANILGKYIMGARNNFRDFDKNEAMGCENTGLHISKQHTEEDDE
KKEEEIKAGEMVPEEREEPESEDPVEPVPGEETTFETVSTPDV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgtgccttgtctactggatcgcccccaagtccaagctgggtaaactgctg
aaggttcccgtcattaagttcctgttacactctgcgtcatacatgtggttcctcatcacc
cttttggcggagtcgattttcatggagatctaccgtagcgatttcgcctcccgaaagcaa
aacattctccacaactctcttcacatgatatgggttgcaggtttcttctggtttgagtgt
aaggaagtttggcttgagggtttgaagagttacttcttggatttatggaacattctggat
atgatggtgctgagcatgtatctggcgtccttcacactgcgcattcttatcatgctaaag
ggatattttctctgtcaggacaccagcacacaagagctatgtgactatttcaccaacaca
gtacgagaggactggaaacaagaggatcctcagctgattgcagagactctctttgccgtg
accagcatgctgagtttcacacgtcttgcctacattctgccggcccatgaatccctggga
accctgcagatatccatgggtagaatgatcgatgacatgatgaggttcatgttcatcctc
atgattattggaacagcatttttgtgtggaataaacaacatatacgtcccatatgttgtt
tccccacatcttggcagatttaatgagacatttaacttcctcttctggaccatgtttgga
atggcaaaccaagaatatgtagacatgcctgattatgctctggctgagtttgtaggaagg
atcttctatgggatattcacactgctcatcgtcatagtgctcctgaacatgcttattgcc
atgatctccaattcatttcagaggattgaggatgatgcagatgtcgagtggaagtttgct
cgctctaaactctacctcagttacttcagggagggtctcactatgccagttccctttaat
atcatcccatctccaaaggctctcttttatgtcttaagaagcatcttccaaaagatttgc
tgttgctgtaacaagaaagccccagaatatcctcccatcacatctgtgtctagcaatacc
ctgaatagcagcggaggtcaaggtgagggcagagtgccataccgcctgcaggtgaccaag
gctctagtgcaccgttacatcgaagccgcacgcagagagtttgaagagagcaagcgtaaa
gatgtcgggaacagaattaccgagctgaataaagttgtcggccggctgcacaccgagatg
aaggacttccaccagaagctgcagtggcggcgcaaaagcgagccagaccaggccaacatt
ctgggcaaatacatcatgggggcaagaaacaatttccgtgactttgataagaatgaggcc
atggggtgtgaaaacacaggtctgcacatcagtaagcagcacacagaagaggacgatgag
aagaaggaagaagagatcaaagcaggagagatggtcccagaggagagggaggagcccgag
tctgaggaccccgtggaacctgtcccaggagaagaaactacttttgagactgttagcact
cctgatgtatga
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