Ctenopharyngodon idella (grass carp): 127496645
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Entry
127496645 CDS
T08802
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127496645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127496645
03021 Transcription machinery [BR:
cide03021
]
127496645
03036 Chromosome and associated proteins [BR:
cide03036
]
127496645
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
ARID
127496645
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127496645
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127496645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
127496645
NCBI-ProteinID:
XP_051720246
LinkDB
All DBs
Position
16:complement(20625102..20645207)
Genome browser
AA seq
1885 aa
AA seq
DB search
MAAQVASATSLNTSPPSELKKPDRDPKEESVPGEKQQENKEPGLESGSPARGELQDRADV
GNAGGGGESEMKNGNGNPSRVNNNQNETTGPEGNNHPGMVHHHAPGFQPASYSYAQHYGR
APFHQHGGQQSPGMAAAAGPGALSSSMMDPYQPNSHDHGFPNHQYNNYSPFGNRSPYPGQ
GYGMNSPRSAPQAQAVGGQSAKQQQPAAAASYSNQRYNMGNPQPTSTPTLNQLLTSPSGA
RGYPNYPPSDYNSQDGAKGPADIGSSSGQYGGGHPGWQQRTHHPPPMSPGSTGQPLGRNQ
TPGSMDQMGKMRGQPYGSGGPYSQQPHQGPPSGPQQGPAYPGQGYGPPGPQRYPMGMQGR
MQYGQQMPSYGQQGPGGYVQQGQQPYYGQHGQGPHSGQQQSPYPQPSPGQPGVQAPYSQQ
PHAPQSSGPHAQAGPPYQQPHMPQQTQGQMPGPSPGSSQSPYSQSSAASQSSQSPYPQQQ
VPQSQPSQQGSSQAPPASQAQPSYPPGQGPQQQQPPPPPSQQPPQTPTPASQQPAGHGQM
PQGQPTSYSQNPPQQQQQQQSPYQRFPPPPQEISQESFSSQSSAPTSGPPLASKSSTEDM
QGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPPVGSP
ASASASRSGPLSPATMPGNQMPPRPSSGQSDGIMHPSMNQPGMGQERGYMQRNPQMAPYG
SPQSSSALSPRQSSGGQVHAGMVSYQQNNSVANYAPQGGGQYGPQGYPRQPGYSGMPNAN
YPGPGMGGSMNPMSGQGGGPLFAGMASGRMPHGQMGARPFGPNMGPNMSPSMGPNMGNMP
PQVGTGMCPPPGLNRKPQDASAMQHGPANSIHIRLPGYPNMSPGPGMMASGPPYVPSMNN
MPGMMNTQGSPYPMGGNMSNNTSGMSPGPDFGMDGKINQAQKMNNKVEGTPKTESKSKKS
SSSTTTNEKITRLYELGPEPERKMWVDRYLAFIEEKAMGMSNLPAVGRKPLDLFRLYMSV
KEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIM
SGDSKKNQAKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPHSQMPPMPSG
RSSVNLQDPFADSDFSRRSTMTPNSGYQSGMSTPEMPVRMGPYEPNKDHFSGMRKVGEQF
MSGGQGPNSSLSDQCNRGPQGPMGNMPMGQRHQYPYGPGYDRRPESGMGTDGSMGPGVPQ
PNIIPSSAEAGMYSPNRYPPQQQRHDSYSNQYPGQGAPPGGSYPNQQPGMYPQQQLNYKR
PGDGSYPPAKRHHDGEMFSGPYNAQQPQPPTQAPPSGPSSGQQEMFNQYNSSYPGSERRP
AGPQNQFTFPFGRDRMQAGTGPNSQGSIPPQMMGSPMQSGPDGPQGGMWQGRGDMGYPSY
PNRQGPPAGPGQGPGYHAMNRSEDMMSSEPRMNHDGQWPGPRQPPYGPGGAGPPMSRPLQ
SNYQSPQTMQNHIPQVSSPTPMPRPMESRTSPSKSPFMPSNIKMQKVGLPVPASHIVPPS
VQPPMMRRDLSFPPGSIEATPPVLKSRRRLTMKEIGTPEAWRVMMSLKSGLLAESTWALD
TINILLYDDNSISNFNLIQLPGFLELIVEYFRRCLIEIFGILREYEVGDPGQRALLDPSV
LKKDENTVEDEVLVEGMEEDGETEEEDEGEEMHRSKHQEQHSAPLQIKQEEKPRTLEDSV
KKEDCQGIEGESSAEPKTSEPPCLELAVTQEKPKQASKFDKLPLKIVRKKDPFVVDCSNK
LGRLQEFDSGLLHWSIGGGDTTEHIQTHFESKMDLLHHRKHLAAQVPDRKRELRRTARHL
HCPHPVKSNEKKWIGSLLQSHPLRK
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacaccagcccgccttccgagctgaaa
aaaccggatcgagacccaaaggaggagtcggtaccgggggagaagcagcaggaaaataag
gaaccgggactagagagcggatctccggctcgcggggaactgcaggaccgggccgatgtg
ggaaatgctgggggaggaggggagtcggagatgaagaacggcaacgggaatccgtcgagg
gtgaacaataatcaaaatgagaccaccggaccggaggggaacaaccaccctgggatggta
caccatcacgcgcccgggtttcagccagcttcctatagctacgcgcagcactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggcca
ggcgcgctgtcgagcagcatgatggacccctatcaacccaactcccatgatcacggcttc
ccgaaccaccagtacaacaactacagtccgttcgggaaccgaagcccgtacccgggccaa
ggctacggcatgaactctccgcgcagcgctcctcaagctcaggcggtaggggggcagtca
gccaagcagcagcagccagcagcggctgcatcttacagcaatcagcggtataacatggga
aacccgcagccaacatccaccccgactctcaaccagcttctcacctccccgagcggtgcc
cggggctacccgaattacccgccgagcgactacaacagccaggacggtgctaagggacca
gcagatataggcagcagcagcgggcagtatggtgggggccatccgggttggcaacaaagg
acccatcacccgccacccatgagtcctggaagtaccggacagcccctgggtagaaaccag
actccaggctccatggatcaaatggggaaaatgcgcggtcagccgtatgggtcaggtggg
ccttactcccagcagccccatcaagggcctccttcagggccccagcagggccctgcttac
ccaggccagggctatgggccccctggcccacagagataccctatgggcatgcaaggacgt
atgcagtacggccaacagatgccatcatacggacagcagggaccagggggttacgtgcag
caggggcagcagccttattatggtcagcacggtcaggggcctcactccggccagcagcag
tcgccatacccccagccgtcccctgggcaaccaggagtccaggcaccttattcacagcaa
cctcatgctccccagtcatctggcccacatgcacaggctggccctccttaccaacaaccc
cacatgccccagcaaactcaggggcaaatgcccggcccctcgccgggctcatcccagtcc
ccgtactcgcagtcctcagcagcatcccagtctagccagtctccctatccacagcaacag
gtgcctcagtcccagccctcacagcaggggagctcccaggctcctcctgcatcccaggcc
cagcccagctacccgcccggccaaggcccccagcagcagcagccgccaccaccaccatca
cagcagccaccgcagacgcctacacctgcttctcagcagcccgcgggacacggacagatg
ccgcagggacagcccacgtcatactcccagaatcccccacaacaacagcagcagcaacaa
tcaccgtatcagcgatttcctcctcctcctcaggagatttcccaggagtcttttagctcc
cagtccagcgctccaacctccggcccgcctttggcatcgaagagcagcacagaggacatg
cagggcagaccctccagtctaccagacctatccggttctatcgatgacctacctactggt
acggagggcgctctgagtcctggagtcagcacatctggagtatctagcagtcaaggagag
cagagcaatccagcacagtcgcccttctccccccacacctctcccccggtgggctcgcct
gccagtgcctcagcatctcgttcggggccgctgtctcctgccacgatgccagggaaccag
atgcctccccgcccttcaagtggacagtctgatgggatcatgcacccttcgatgaatcaa
cctggcatgggacaagagagaggatatatgcagagaaaccctcagatggctccctatggg
tctccacagtctagttctgctttgtctcctcgtcagtcatctggaggccaggtgcatgct
ggaatggtttcttatcaacagaacaactctgtggcgaactatgcgcctcagggtggtggt
caatatgggccacaaggttatcccaggcagcctggttatagtggcatgcctaatgccaat
tacccaggccctggcatgggcggatccatgaatcctatgtctgggcaaggaggagggcca
ctgtttgcaggcatggcttctgggaggatgcctcatggccagatgggtgcacgtcccttt
ggccccaacatgggtcccaacatgagtcctagtatgggccctaatatgggtaacatgccc
cctcaagtgggaaccgggatgtgcccacctccaggcctcaacagaaagccacaggacgcc
tcagcaatgcagcatggacccgccaactcgatacacataagactaccaggttaccccaat
atgtctcctggtcctggtatgatggcctcaggacctccgtatgtcccctctatgaacaac
atgcctgggatgatgaacacccagggttctccctaccccatgggtggtaacatgtctaac
aacactagtggcatgtcccctggtccagactttggtatggatgggaaaattaaccaagcc
cagaaaatgaataacaaagttgagggtacacccaagacagaatcaaaatccaagaagtca
agttcctccacaacaaccaatgagaagatcactcggttgtatgagctaggcccagagcca
gaaagaaagatgtgggtagaccgttacttggctttcatagaggaaaaagccatgggcatg
agtaaccttccagctgtgggacgtaagccccttgatctcttccgcctctacatgtccgtc
aaggagattggaggtcttacacaggttaataagaacaaaaaatggagggagctggccaca
aatctgaacgtggggacctccagcagtgccgccagctctctgaaaaagcagtacatccaa
tgtctgtatgcttttgaatgtaaaattgagcgtggagaagacccaccacctgacattatg
tctggagatagcaaaaagaaccaggccaaaattcagcctccctccccagctggatctggc
tctctccaggggccccagacaccacagtccaccagcagctccatggcggaaagcggagac
ttgaagccccctactcctgcctccaccccacacagccagatgcccccaatgccaagtggc
aggagcagtgtgaacttgcaagatccatttgctgatagcgacttctcacggagaagcact
atgacccccaactctggctaccagtcaggcatgagcaccccagagatgcctgttcgcatg
ggaccctatgaacccaataaagaccacttcagtggtatgcgtaaagttggagaacagttc
atgtctggtgggcagggtcccaacagcagtcttagtgatcagtgcaacaggggaccacaa
ggccctatgggaaacatgcctatgggccagcgacaccagtatccatatggtcccggttat
gacagaagaccagagtcagggatgggcacagatggcagcatggggcctggagtgccacag
ccaaatataataccttccagtgctgaagctggaatgtactcaccaaatcgttaccctcca
cagcaacagcgacatgattcctatagtaatcagtatcctgggcagggtgcgcctcctggt
ggctcctatccgaatcagcagcctggaatgtacccgcaacaacaattgaactacaaaagg
ccaggtgatggcagctacccaccagctaaacggcatcatgatggtgagatgttcagtggg
ccatacaacgctcagcagccacagccaccaacgcaggctccccctagtggtccctcaagt
ggtcagcaggaaatgtttaaccagtataacagttcttaccctggttctgagcgccgccca
gctggtcctcagaatcagttcactttcccctttggaagagatcggatgcaagcagggacg
ggcccaaactcccagggttccattccacctcaaatgatgggcagtccaatgcagtctggt
cctgacggtcctcaaggtggcatgtggcagggcagaggtgatatgggctaccccagttac
cctaaccgtcaaggacctcctgctggtcctggccagggacctggctaccatgcaatgaac
cgatctgaagacatgatgtcatctgaaccacgcatgaatcatgatgggcagtggcctggg
ccacgacaacccccatatggccctggtggtgcaggtccaccaatgagcagacccttgcag
tccaactaccagtctcctcaaaccatgcaaaaccacattccacaggtttcaagccccacg
cccatgcctcgccccatggaaagtaggacttcccccagcaaatcacccttcatgcccagc
aatatcaaaatgcagaaggtgggacttccagtccctgcatctcacattgtacctccctca
gtacagcctccaatgatgagaagagacctatccttccctccaggttccatagaggctacg
ccgccagttctcaaatcacgcaggcgtcttaccatgaaagaaattggcactccagaagca
tggagagtcatgatgtcccttaaatcaggactgttggcagagagcacatgggctttagac
accatcaacatcttgttatatgatgacaacagtatttcaaatttcaaccttatacagctc
cctggtttcctggaactaattgttgagtatttccgccgttgcctcattgagatctttggg
attctgagggaatatgaagttggtgatccaggacaaagagctctgttggatcccagcgtg
ctcaaaaaagatgaaaacactgtggaagacgaggtattggtggagggcatggaggaagat
ggagaaacagaggaggaagatgaaggagaggaaatgcacaggtcaaaacatcaagaacaa
cattcagcaccgctccagataaaacaggaagaaaaaccaaggacgcttgaagactctgtg
aagaaagaagattgccaagggattgaaggagagtcatctgcagaacccaagacttcagag
ccaccatgtctcgagttggctgtgactcaagagaagcccaaacaggctagcaagtttgat
aagcttcccttgaagattgtaagaaagaaggatccatttgtggtggactgctcgaataag
cttggccgattgcaggaatttgacagcggccttctgcactggagtatcggtggaggtgat
acaacagaacacatccaaacccactttgaaagcaagatggacctgttgcaccatcggaag
catcttgctgcccaggtcccagacagaaagagagagctcagaaggacagccaggcacctt
cactgccctcatccagtgaagagcaacgaaaagaagtggatcggcagccttctccagagt
catccactgagaaagtga
DBGET
integrated database retrieval system
