Ctenopharyngodon idella (grass carp): 127496661
Help
Entry
127496661 CDS
T08802
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127496661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127496661
Spliceosome [BR:
cide03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127496661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
127496661
NCBI-ProteinID:
XP_051720278
LinkDB
All DBs
Position
16:complement(21806205..21813149)
Genome browser
AA seq
508 aa
AA seq
DB search
MSLADELLADLEEAGEEEDGLYPGGEEGESDGEPGERQTGGLEDIPEEMEVDYSGTESVT
SIAKLRHSKPFAEIMDKIGQYVGNQRKNSEVSGPVEADPEYRLIVAANNLTVEIDNELNI
IHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNLEKCKNNETLQQILTNATIMVVSV
TASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAA
KIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDLRR
KAARLVAAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDG
QRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVRQ
AQVNDSTKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAAE
KKVAEANQKYFSNMAEFLKIKREKEDKV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcagacgagctgcttgccgacttggaggaggcaggagaagaagaggacggg
ctgtaccccggtggagaagagggtgagagtgatggggaacccggcgagagacaaactggg
ggtctggaggacatacccgaggagatggaggtggattacagtgggacggagagtgtcaca
tccatagcaaaactaagacacagcaagccatttgctgaaatcatggataaaatcggtcaa
tatgttggaaatcaacgaaagaattcggaagtgtctggacctgttgaagcagacccagaa
tacagactcattgtcgccgccaacaatctgacagtggaaatagacaatgaacttaatatc
attcacaagtttgttcgtgacaagtactccaaaagatttcctgaactggagtcccttgtg
ccaaatgcactagattatatcagaactgttaaggagctgggcaacaatctcgagaagtgc
aaaaacaacgagactctccagcagatcctgaccaatgctactatcatggtggtcagtgtc
accgcctcaacaacacaaggaactatgcttggtgatgatgagctccagcgattggaggaa
gcgtgtgacatggcccttgagctcaaccaatcaaaacacaggatctatgaatatgtggaa
tctaggatgtcatttattgctccaaatctttccattattgtcggagcttcaactgctgcc
aagatcatgggtgttgctggtgggctgactaacctgtctaagatgcctgcatgtaatctg
atgttgctgggagctcagcggaggacactgtctggattcagcagcacatccctgctgccc
catacaggctacatctaccactgtgatgtagtgcagtcactgcctccagatctgaggaga
aaagcagctcgtctggttgcagctaaatgcactctggcttctcgtgtggacagttttcat
gagagttctgatggcaaggttggctatgatctgaaggaagagattgagcgaaagtttgat
aaatggcaggagcccccaccagtcaaacaggtgaagcctcttccagctcccctggatgga
cagaggaagaagagaggaggaagaaggtatcgtaagatgaaagagaggctgggtctgaca
gaaatcaggaaacatgccaacagaatgacatttgcagagatcgaggatgatgcttatcag
gaggatctgggcttcagtctcggtcagctgggaaaatctggcagtggcagggtcaggcaa
gctcaggtcaatgactccaccaaggccagaatatccaaatccttacagcggacactgcaa
aagcagagcatgacatacggtgggaagtccactgtcagagaccgatcatctggaaccagc
tcaagtgtggccttcactcctttacaggggctcgagattgtgaacccacaggctgcagaa
aagaaggtggccgaagccaatcagaaatatttctccaacatggctgagttcctcaagata
aagcgtgaaaaggaggacaaggtgtga
DBGET
integrated database retrieval system
