Ctenopharyngodon idella (grass carp): 127496755
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Entry
127496755 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127496755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127496755
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127496755
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127496755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
Baculo_IE-1
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
127496755
NCBI-ProteinID:
XP_051720461
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All DBs
Position
16:complement(31581724..31586161)
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AA seq
402 aa
AA seq
DB search
MSETPVQPHMRAEDILAEIRANLLECKVCFEKFSIQKRDHTPRNLLCGHVLCLKCICALS
HPVNQRLECPFCRKLGDVGSTSECRALTDLQELLLSKACPRLYDRVMGWTESLGSGMLRL
RSAFGGWGNIVNPSGMVVSETSGQIVLVHDGEKRVAVFGAQGTLLDGFGLYGHDPSDLCH
PLDVALTKSGHVLVTDGGDQSVKVFTSKGHLVVAIRDSFRLPWGVDVDTRGCVFVTDAEM
GTLSQVIIDFSRGVVLVNRVVFKDLTCPRTVASCKASGNIAIVERFQAGFNASCLRIFNS
DFVPLTQVDSFTLNLKNSLSLSISSVVFDRNGDVIVGDVQNGMVWNLGKPQETPALTPLV
SGLRRPVALAVTTLNVLVVLDGGDHAVKFYAADTDDLYCDKK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagacgcccgtccaaccacatatgagagcggaagacatcctagcagagatccga
gcaaacctgctggagtgcaaagtgtgttttgagaagttctccattcagaagcgagaccac
acaccccgaaatcttctctgtggccacgtgctgtgtctcaaatgcatttgtgcactttcc
catcctgtaaaccagaggctggagtgtcccttctgtaggaaactgggggacgttggcagc
acctccgaatgccgtgcgctcaccgatctccaggagcttctgctgtcaaaagcttgtccc
aggttgtatgatagagtcatgggatggactgaaagcttgggatctgggatgctgcgcctc
cgttcggcctttggaggatggggaaacattgttaacccttcagggatggttgtttctgaa
acatcaggacagattgttttggtgcacgatggtgagaaaagagttgccgtttttggtgcg
caaggaactcttttggacggctttggactttatggacacgacccgtctgatttatgtcac
ccacttgatgttgcgttgaccaaaagtggacatgttttggtcacagatggtggtgaccaa
tcagtcaaagtcttcacttccaaaggccatcttgtggtggccatccgagactcttttcgg
ctgccgtggggtgttgatgtggacacccgtggatgtgtttttgtgaccgacgctgagatg
ggaacacttagccaggtcataatagacttttctcgtggggtagtcctagttaacagagtg
gttttcaaagatcttacgtgtccacgtacagtagcttcttgcaaagcatcgggaaacatc
gcaattgtggagcgttttcaggccggattcaatgcttcatgtttgagaatattcaatagc
gattttgttcctttgacgcaggtggacagtttcactcttaacttgaagaactctctgagt
ttgtctatatcttcagtggtttttgatcgaaatggagatgtgattgtaggggatgtgcag
aacgggatggtctggaatttgggaaagccgcaggaaacacctgcgctgactccactagtg
agtggactgcggcgtccagtggcattggctgtgacaacactgaatgtgcttgttgtcttg
gacggaggagatcatgcagtcaagttctatgcggcagacacagatgatttgtactgtgat
aaaaaatga
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